PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc005255.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family B3
Protein Properties Length: 360aa    MW: 40413.4 Da    PI: 10.1286
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc005255.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B383.91.5e-2655151999
                            HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SEE CS
                     B3   9 dvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.sef 90 
                            +v+k++rlv+pk++ae++    ++++ ++  l +ed +g+ W+++++y+++s++yv+tkGW++Fvk+++L++gD+v F++  g  s+ 
  Cse_sc005255.1_g030.1  55 YVGKLNRLVIPKQHAERYfpldSSNNDKGLLLNFEDMNGKLWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGvGAtSKD 142
                            799******************9666678899************************************************655777888 PP

                            ..EEEEE-S CS
                     B3  91 elvvkvfrk 99 
                            +l++  +r+
  Cse_sc005255.1_g030.1 143 RLFIDCRRR 151
                            888888776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 360 aa     Download sequence    
MGVAGVKSLW TGGVKAQGSN DVGLRASSWG QIETFFFYPL LSPNHFFPRN DFGYYVGKLN  60
RLVIPKQHAE RYFPLDSSNN DKGLLLNFED MNGKLWRFRY SYWNSSQSYV MTKGWSRFVK  120
EKKLDAGDIV SFQRGVGATS KDRLFIDCRR RVNSSSPSHQ LSSSNLSLIH PWNPLVLQSF  180
PAKRNPNMIL QPPNNNFFYN TNWDGNNLDR SRSFYFGPSV FGAQQQHVQM MQRNGFGFGV  240
GVDPPLTSPS PTQPVHGKSS GKRLRLFGVN MDCSFSEEEN EQDPHHRTLV PSPSSSSSFS  300
TIPYLQLNSY GGGTECNQSS ILSSSSSAHD FNIVAKSTAS NMSLDLGIKK KVSIWPFKNL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46870.12e-55B3 family protein