PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc005219.1_g040.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family B3
Protein Properties Length: 276aa    MW: 32221 Da    PI: 9.5831
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc005219.1_g040.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B338.52.1e-1221981695
                           EE--HHH.HTT.---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
                     B3 16 lvlpkkfaeeh.ggkkeesktltled.esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95
                           l lp +f +++   + +++k+ ++++ + g +W++k+  +k ++ry +t+GW + vk+ +L+ gD++vF l ++s+f+ ++ 
  Cse_sc005219.1_g040.1 21 LPLPDDFYKRYlR-N-QQTKDPIVRSaKGGYKWRLKI--EKVGERYSFTDGWLKVVKDVDLRYGDTLVFWLLNNSTFKVTFY 98
                           779********53.3.35567777884667*******..*******************************999999976665 PP
2B350.73.3e-161472251290
                            HTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
                     B3  12 ksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgr..yvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                            +++ l+lpkkf+    g+++e+  t+++++++g++W++ ++ +k+  +  y+l+ GW++F k n+L egD +vFk++ ++++
  Cse_sc005219.1_g040.1 147 THDVLRLPKKFV-GLpGIDHEG--TIIMKNQDGKEWKMGVRLDKSYWTerYTLSPGWRKFKKCNKLTEGDECVFKFITSESK 225
                            567899******.553777555..8***************9977653345*************************9976554 PP
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    
MAPRTYPSFF KIIRDPTRPY LPLPDDFYKR YLRNQQTKDP IVRSAKGGYK WRLKIEKVGE  60
RYSFTDGWLK VVKDVDLRYG DTLVFWLLNN STFKVTFYTV NECEKVLPPR KQVVKLEDEV  120
EDEDGDCNDG PDVDPDDPYF VLIIPKTHDV LRLPKKFVGL PGIDHEGTII MKNQDGKEWK  180
MGVRLDKSYW TERYTLSPGW RKFKKCNKLT EGDECVFKFI TSESKLCLAK VTKKKPATEA  240
VTKGQQPRQH GGRADMESED EFVEVVKRGR GRPRKQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1267275KRGRGRPRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26680.13e-14B3 family protein