PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc005157.1_g030.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | FAR1 | ||||||||
Protein Properties | Length: 185aa MW: 21072 Da PI: 10.2245 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 22.4 | 4e-07 | 26 | 113 | 7 | 90 |
FAR1 7 AkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.......dgkwevtkleleHnH 87 A++ GF ++k ++k+ g ++ +f+Cs++g+ ++e + ++ +r++ + +++C +l k k ++ w + l HnH Cse_sc005157.1_g030.1 26 AQSNGFLIVKGRTKTD--RGYKYSIKFKCSRHGTYAREGLE-DELERQTGTAKINCPFRLLAKFIKgrtgttkTSGWILRVKCLRHNH 110 8899*******98888..6667***************9999.8888889999*****9998775543323333556777777799*** PP FAR1 88 ela 90 +++ Cse_sc005157.1_g030.1 111 DFV 113 986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 185 aa Download sequence |
MSTSPFDTQE VFGTEVALTD WVQSTAQSNG FLIVKGRTKT DRGYKYSIKF KCSRHGTYAR 60 EGLEDELERQ TGTAKINCPF RLLAKFIKGR TGTTKTSGWI LRVKCLRHNH DFVDSFHGFS 120 QAMQLKESEL VLVDQLTKHQ VAPRIILSSL KESDPNNVSS IKMVYNAQEK IRRASRGDLT 180 RYNSF |