PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc005111.1_g040.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 616aa MW: 71085.4 Da PI: 7.7879

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc005111.1_g040.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	50.8	5.7e-16	133	228	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtkl 81 ++Y++Y++ GF+++k+ ++ + ++g + + +C+keg +++ + + +ek++r+++ + tgC+a+++++++ +gk++++k+ Cse_sc005111.1_g040.1 133 NMYSTYSEVGGFQIKKAGQRLT-KSGIVQAKYIMCNKEGAPRHINVDtldpkhSEKQKRNTTLHVTGCQARIRLELDIvSGKYKLIKF 219 58*************99888.7887999999***9998888899998999999999***********99***** PP FAR1 82 eleHnHela 90 +HnH l Cse_sc005111.1_g040.1 220 IAKHNHMLI 228 ****997 PP

Sequence ? help Back to Top
Protein Sequence Length: 616 aa Download sequence
MKPPPKSHQT TTLTMKQPSD PSPSHQTTAV TMKPPSDPSS SHQTVAITME PPPINREILP 60 PVDESDLIEV PIDESQDKDD VVNEITNSMR SPRPTLYEQT ETPGGSIYWE PHVEGIVAPQ 120 VGKYYDTIEE AINMYSTYSE VGGFQIKKAG QRLTKSGIVQ AKYIMCNKEG APRHINVDTL 180 DPKHSEKQKR NTTLHVTGCQ ARIRLELDIV SGKYKLIKFI AKHNHMLIPK EYKHFTKXFS 240 KAKYKVEESE LVAMFWADEV AKCNFKEFGD IVSFDATFRS NKYNMVFVPF TGVDNHKKCV 300 TLGSGMLLKE DTESYTWLLK AFMTAFSKEP TMIIWNMFME PMEFEEKWAK LIEDFGLQNH 360 KWMTKMFKLR EMWIPAYFIT SPLFGLMRTT SRSESENSFF KSFTSPGATI VSFMMSYQSA 420 MERQRYIQEH LDFKTLDAAP KCETKLAIER HAAKVYTRTI FLLVQTEIKE ACWTCAIQEL 480 KIEEGCEIVT VRDKNPAAYR ILNKEVAKEL AEEGETVATA KFVDYKNRDI NFIPKQYILR 540 RWTRDIIPHD LRRKRNKYGE TNEEIERLTN EATFLVDECL FRLSKDKVKM GAFVEKLKTL 600 KTEVEAEVPN PPSRNT

Sequence ? help Back to Top

Protein Sequence Length: 616 aa Download sequence

MKPPPKSHQT TTLTMKQPSD PSPSHQTTAV TMKPPSDPSS SHQTVAITME PPPINREILP  60
PVDESDLIEV PIDESQDKDD VVNEITNSMR SPRPTLYEQT ETPGGSIYWE PHVEGIVAPQ  120
VGKYYDTIEE AINMYSTYSE VGGFQIKKAG QRLTKSGIVQ AKYIMCNKEG APRHINVDTL  180
DPKHSEKQKR NTTLHVTGCQ ARIRLELDIV SGKYKLIKFI AKHNHMLIPK EYKHFTKXFS  240
KAKYKVEESE LVAMFWADEV AKCNFKEFGD IVSFDATFRS NKYNMVFVPF TGVDNHKKCV  300
TLGSGMLLKE DTESYTWLLK AFMTAFSKEP TMIIWNMFME PMEFEEKWAK LIEDFGLQNH  360
KWMTKMFKLR EMWIPAYFIT SPLFGLMRTT SRSESENSFF KSFTSPGATI VSFMMSYQSA  420
MERQRYIQEH LDFKTLDAAP KCETKLAIER HAAKVYTRTI FLLVQTEIKE ACWTCAIQEL  480
KIEEGCEIVT VRDKNPAAYR ILNKEVAKEL AEEGETVATA KFVDYKNRDI NFIPKQYILR  540
RWTRDIIPHD LRRKRNKYGE TNEEIERLTN EATFLVDECL FRLSKDKVKM GAFVEKLKTL  600
KTEVEAEVPN PPSRNT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	9e-36	FAR1 family protein