PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc004998.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 208aa    MW: 23382.5 Da    PI: 5.7987
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc004998.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.81.6e-19109159255
                    AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                            +y+GVr+++ +g+++AeIrdp +ng  +r++lg+f tae+Aa a++ a+ +++g
  Cse_sc004998.1_g020.1 109 HYRGVRRRP-WGKYAAEIRDPAKNG--ARVWLGTFETAEDAAVAYDMAAYRMRG 159
                            8********.***********9987..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    
MMRNNGFDSD FALLESIRRH LLDDTAPTMS CRSNNFLFPH LSETWGELPL QQNDSEDMLI  60
ATFLSEALDF QLPPSPEMTS SPENTMVVKS EPETSSFEPE SLGAQKGKHY RGVRRRPWGK  120
YAAEIRDPAK NGARVWLGTF ETAEDAAVAY DMAAYRMRGS RALLNFPLRI NSGEPEPVRI  180
TSKRKMTSPS EGLLAKKVKV ESEMVYGC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17500.11e-52ERF family protein