PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc004963.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB
Protein Properties Length: 225aa    MW: 24822.2 Da    PI: 10.6344
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc004963.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding353.4e-114799146
                           TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.......TTS-HHHHHHHHHH CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.......kgRtlkqcksrwqk 46
                           +g W + Ed +l + v+++G+++W++I++ ++          ++k+c++rw +
  Cse_sc004963.1_g020.1 47 KGHWKPSEDVKLREFVALHGPKNWNLISEQLPgrsefllYMNSGKSCRLRWVN 99
                           789*****************************666666633378999999987 PP
2Myb_DNA-binding39.21.6e-12109151347
                            SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
        Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                            ++++eE + l  a+  +G+  W++Iar ++ gRt++ +k+ w+ +
  Cse_sc004963.1_g020.1 109 AFSKEENDVLMAAHVVYGNQ-WSKIARFLP-GRTDNRIKNQWHVL 151
                            69****************99.*********.***********975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    
MVTPSFAPIV QEGVIDDLHN QISSTSLAPK PNSRKGGKGG GSRRRLKGHW KPSEDVKLRE  60
FVALHGPKNW NLISEQLPGR SEFLLYMNSG KSCRLRWVNQ LDPRTKNCAF SKEENDVLMA  120
AHVVYGNQWS KIARFLPGRT DNRIKNQWHV LTARRHKNVV TRLCVHVSGD SINGSSGSTI  180
TFLGQSTESS SFACMNPPSV VSAGLPNAIA LRPSSQFIDF LGVGE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26780.12e-44MYB family protein