PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc004963.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | MYB | ||||||||
Protein Properties | Length: 242aa MW: 26702.3 Da PI: 10.4398 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 45.4 | 1.8e-14 | 47 | 92 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r W +Ed +l++ v+ +G ++Wk+I+ ++ gR++k+c++rw++ Cse_sc004963.1_g010.1 47 RRHWELWEDIKLKEFVACHGARDWKLISVQLP-GRSGKSCRLRWLNQ 92 567*****************************.***********996 PP | |||||||
2 | Myb_DNA-binding | 36 | 1.6e-11 | 102 | 143 | 4 | 47 |
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +T eE + l++ ++ +G++ W+ Ia ++ gRt++++k+ w+ + Cse_sc004963.1_g010.1 102 FTIEENDVLIRTHEIFGNK-WSQIATFLP-GRTDNSIKNQWHVL 143 899****************.*********.***********975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 242 aa Download sequence |
MAPPSLAPTA QNGVVENPQN EVMNSSSSPK IVQKQRGTQG RENKRDRRHW ELWEDIKLKE 60 FVACHGARDW KLISVQLPGR SGKSCRLRWL NQLDPKIKKT MFTIEENDVL IRTHEIFGNK 120 WSQIATFLPG RTDNSIKNQW HVLTSLRRKN VTGASSSSAY NRHVSVDSAN NSSGSTITLL 180 GKSIVINEDR SISCMNKPAS PSAVTVAYGS GYIAGTSTFI PSGVIAPPAQ PKFIDFLGVG 240 DQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G26780.1 | 2e-39 | MYB family protein |