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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc004901.1_g020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | FAR1 | ||||||||
Protein Properties | Length: 757aa MW: 87999.4 Da PI: 8.7891 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 67.4 | 3.5e-21 | 58 | 166 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...................tekerrtraetrtgCkaklkvk 69 +fY++Y+k++GF vrk ++k ++ + ++f Cs+eg++e ++ +ek++r+r + r+gC ak++++ Cse_sc004901.1_g020.1 58 NFYKDYGKRAGFVVRKGGHYKPNKGEDPNLKWFLCSREGTNEGKEVVddsknvvsehsditmdenvKEKKKRNRGSFRCGCLAKMRIR 145 6***************************************998876688999*************99999****************** PP FAR1 70 kekdgkwevtkleleHnHela 90 k + + +ev+++++ HnH+l+ Cse_sc004901.1_g020.1 146 KIEGNLYEVYTFVEGHNHPLV 166 *******************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 757 aa Download sequence |
MLSVICVNHT DVQVVRVKDH VGFYTCDDKG NRTWFPEIDI GDKPVEGCKF VSIDQAYNFY 60 KDYGKRAGFV VRKGGHYKPN KGEDPNLKWF LCSREGTNEG KEVVDDSKNV VSEHSDITMD 120 ENVKEKKKRN RGSFRCGCLA KMRIRKIEGN LYEVYTFVEG HNHPLVAEKD MIFMKSSRDM 180 TYTKQHFLFQ ASNANISPST GFKLLKQKCG GFDRVGATVV DCKNQKKKIN LFIGDRDAQM 240 AVEKLLSKKL HTPGFYVNYK TGDDDKLVGL FWADEQAIKD YAIFGDIISF DATFRSNKYK 300 MVFVPFTGIN HHNRCITFAS GLLSDETVGA YKWLLDEFKN AFGKNPNVGT AICSKTDFKR 360 RICDIVWTDQ ILPVDFESEW ECMINDFELD DNKWLKDMFG MRERWIPAYL RDEPMAGLMR 420 TTSRSKSENH FFGKWTSPHL TLVEFLSHYD TAIEYQRYIE RKNDHDSRYR KPVLKTYLQL 480 EKEASTFYTQ TIFFDVQYEI YASYSHYMSV NIFQIDDAEK YSIRDMQADN KFRHDSNFVV 540 YEVDFCKSEL EIKCSCKHYE AYGLLCRHAF YVLRMNNIKE FPLKYLNKRW LKNAKPFNYV 600 VTKVVAESES SLQSEVFDLY EIFESTVDRL VHNLDKLKIF KDQMEELLAK AKIDVPVVPK 660 LNSKDVLSSM LGVKEPKSHN IRNPDESSNK GTGVHSRWKS IVEVEKDESD KRRTCSKCGR 720 KDGHNSKTCT KEPLHPSKKI KKTVKPTRTG LRNSKCN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 2e-73 | FAR1 family protein |