PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc004901.1_g020.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 757aa    MW: 87999.4 Da    PI: 8.7891
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc004901.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR167.43.5e-2158166190
                   FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...................tekerrtraetrtgCkaklkvk 69 
                            +fY++Y+k++GF vrk  ++k ++ +    ++f Cs+eg++e ++                     +ek++r+r + r+gC ak++++
  Cse_sc004901.1_g020.1  58 NFYKDYGKRAGFVVRKGGHYKPNKGEDPNLKWFLCSREGTNEGKEVVddsknvvsehsditmdenvKEKKKRNRGSFRCGCLAKMRIR 145
                            6***************************************998876688999*************99999****************** PP

                   FAR1  70 kekdgkwevtkleleHnHela 90 
                            k + + +ev+++++ HnH+l+
  Cse_sc004901.1_g020.1 146 KIEGNLYEVYTFVEGHNHPLV 166
                            *******************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 757 aa     Download sequence    
MLSVICVNHT DVQVVRVKDH VGFYTCDDKG NRTWFPEIDI GDKPVEGCKF VSIDQAYNFY  60
KDYGKRAGFV VRKGGHYKPN KGEDPNLKWF LCSREGTNEG KEVVDDSKNV VSEHSDITMD  120
ENVKEKKKRN RGSFRCGCLA KMRIRKIEGN LYEVYTFVEG HNHPLVAEKD MIFMKSSRDM  180
TYTKQHFLFQ ASNANISPST GFKLLKQKCG GFDRVGATVV DCKNQKKKIN LFIGDRDAQM  240
AVEKLLSKKL HTPGFYVNYK TGDDDKLVGL FWADEQAIKD YAIFGDIISF DATFRSNKYK  300
MVFVPFTGIN HHNRCITFAS GLLSDETVGA YKWLLDEFKN AFGKNPNVGT AICSKTDFKR  360
RICDIVWTDQ ILPVDFESEW ECMINDFELD DNKWLKDMFG MRERWIPAYL RDEPMAGLMR  420
TTSRSKSENH FFGKWTSPHL TLVEFLSHYD TAIEYQRYIE RKNDHDSRYR KPVLKTYLQL  480
EKEASTFYTQ TIFFDVQYEI YASYSHYMSV NIFQIDDAEK YSIRDMQADN KFRHDSNFVV  540
YEVDFCKSEL EIKCSCKHYE AYGLLCRHAF YVLRMNNIKE FPLKYLNKRW LKNAKPFNYV  600
VTKVVAESES SLQSEVFDLY EIFESTVDRL VHNLDKLKIF KDQMEELLAK AKIDVPVVPK  660
LNSKDVLSSM LGVKEPKSHN IRNPDESSNK GTGVHSRWKS IVEVEKDESD KRRTCSKCGR  720
KDGHNSKTCT KEPLHPSKKI KKTVKPTRTG LRNSKCN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-73FAR1 family protein