PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc004807.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 367aa MW: 42200.1 Da PI: 8.7561

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc004807.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	54.7	3.3e-17	53	136	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 +fY++YA e+GF +rks+ +k+ g t + + Csk g +++++ + tr +t+t+C ak++v +++gk +++++leHnH Cse_sc004807.1_g020.1 53 DFYKKYAFETGFGTRKSSIRKN---GDKTYYALGCSKGGLYVPKTQS----SLTRLSTKTKCMAKVNVIVSRNGKCIISRVSLEHNHV 133 6**************99887...77789*******998777....99********************************9 PP FAR1 89 lap 91 l+p Cse_sc004807.1_g020.1 134 LSP 136 975 PP

Sequence ? help Back to Top
Protein Sequence Length: 367 aa Download sequence
MSELCMESPE IEQDGTSLNP QDAEFFEDHN VIDIFQETPK AGMKFDSEEE LYDFYKKYAF 60 ETGFGTRKSS IRKNGDKTYY ALGCSKGGLY VPKTQSSLTR LSTKTKCMAK VNVIVSRNGK 120 CIISRVSLEH NHVLSPKKSR YHRSHKKMDS YSKRRLELND CAGIPLNKNF HSLVVEAKGY 180 ENMSFDERDC RNYIAKVRQL RLGVGDAEAL RDYFVRMQRR SPNFFYVLDI DDDGRLKNVF 240 WADARSQAAY ESFGDVITFD STYLTNEYSM PFAPFVGVNH HGQSILLGCG LISHEDTHTY 300 EWLFRPWLTC MGGRSPKAII TDQCQAMRAA VATVFPESYH RLCLWHIMKK IPQKFGGFSQ 360 YKAIKKP

Sequence ? help Back to Top

Protein Sequence Length: 367 aa Download sequence

MSELCMESPE IEQDGTSLNP QDAEFFEDHN VIDIFQETPK AGMKFDSEEE LYDFYKKYAF  60
ETGFGTRKSS IRKNGDKTYY ALGCSKGGLY VPKTQSSLTR LSTKTKCMAK VNVIVSRNGK  120
CIISRVSLEH NHVLSPKKSR YHRSHKKMDS YSKRRLELND CAGIPLNKNF HSLVVEAKGY  180
ENMSFDERDC RNYIAKVRQL RLGVGDAEAL RDYFVRMQRR SPNFFYVLDI DDDGRLKNVF  240
WADARSQAAY ESFGDVITFD STYLTNEYSM PFAPFVGVNH HGQSILLGCG LISHEDTHTY  300
EWLFRPWLTC MGGRSPKAII TDQCQAMRAA VATVFPESYH RLCLWHIMKK IPQKFGGFSQ  360
YKAIKKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G80010.1	6e-71	FAR1 family protein