PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc004793.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

bHLH

Protein Properties

Length: 333aa MW: 37143 Da PI: 5.9143

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc004793.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	24.5	4.9e-08	236	276	9	54
HHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 9 ErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 r+RR+ri +++ L++l+P + K++ a++L +A +Y+k L Cse_sc004793.1_g010.1 236 ARQRRERISERIRVLQKLVPGgN------KMDTASMLDEAANYLKFL 276 69****************955......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 333 aa Download sequence
MDDLQFSWYN MIHAYDHQQQ SFNYDSDNIF LNQLPHLSPT DWTDQAIEND LICTNGFQEI 60 KNVISSNNNA AASLERLLSG PNSSNDASDD GVSIIFPDGK SSLWRSNVNV ARNNNGISGV 120 SSADSVTDDG VVSQTLQQIS QFECSSGKRT RETVEISDNQ SNPKRSRSNP SLPTSSNINF 180 QQPGNSETDT EAIAQMKEMI YREAAFRPVS FAAETVVEKP KRKNVRISSD PQTVAARQRR 240 ERISERIRVL QKLVPGGNKM DTASMLDEAA NYLKFLRSQV KALEQLGHNS KTINAHSYAS 300 LVAPFTQTPF SMQTQYSFPC ENLYPNPPSS IHH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	237	242	RQRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21330.1	5e-47	bHLH family protein