PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc004717.1_g080.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

bHLH

Protein Properties

Length: 467aa MW: 52086 Da PI: 8.0913

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc004717.1_g080.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	51.2	2.2e-16	263	309	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn+ E+rRR+riN+++ L++l+P++ K +Ka++L +A+eY+k+Lq Cse_sc004717.1_g080.1 263 VHNMSEKRRRSRINEKMKALQKLIPNS-----NKTDKASMLDEAIEYLKQLQ 309 6***********************7.....5****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 467 aa Download sequence
MLYPRVCALE SCKSVSVASK LSHVNMGYSF RRAPRGGAEQ VQFLEMLAKV EGISLIYMRD 60 RWIWSLEGSG EFSVASVRRL IDDHMLLEVS SKTRWIKAVL IKLNVHAWKV RLDCLPIRLN 120 ISKRSMDIDS ILCPTCETTD DISLFLRQIL LKSSSLTSTS ATTTMLCSSV VGAKQMQCEM 180 PRVQPVYSSG LVSVPEWGCA DPVGGYAPVA YVSSSSVGTL DNDVDEFDCE SEEGGFENLL 240 EDMATKSNQT PRNPSKRTRA AEVHNMSEKR RRSRINEKMK ALQKLIPNSN KTDKASMLDE 300 AIEYLKQLQL RVQMLTMRNG INLYSMSVPP GLLQPQQLPY SGTGFNEGNE PPNMTRLNQE 360 PHMNPMLNLP IQFTSRSNPS IPNLSHIMNE GLPSSFRPPL GHFKGCLISS SGSDGTQLMN 420 SEQKLGFAPE MNLRTMQGAK INDLDLRVVG QVKVFGKELL EFLNLEP

Sequence ? help Back to Top

Protein Sequence Length: 467 aa Download sequence

MLYPRVCALE SCKSVSVASK LSHVNMGYSF RRAPRGGAEQ VQFLEMLAKV EGISLIYMRD  60
RWIWSLEGSG EFSVASVRRL IDDHMLLEVS SKTRWIKAVL IKLNVHAWKV RLDCLPIRLN  120
ISKRSMDIDS ILCPTCETTD DISLFLRQIL LKSSSLTSTS ATTTMLCSSV VGAKQMQCEM  180
PRVQPVYSSG LVSVPEWGCA DPVGGYAPVA YVSSSSVGTL DNDVDEFDCE SEEGGFENLL  240
EDMATKSNQT PRNPSKRTRA AEVHNMSEKR RRSRINEKMK ALQKLIPNSN KTDKASMLDE  300
AIEYLKQLQL RVQMLTMRNG INLYSMSVPP GLLQPQQLPY SGTGFNEGNE PPNMTRLNQE  360
PHMNPMLNLP IQFTSRSNPS IPNLSHIMNE GLPSSFRPPL GHFKGCLISS SGSDGTQLMN  420
SEQKLGFAPE MNLRTMQGAK INDLDLRVVG QVKVFGKELL EFLNLEP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36930.1	6e-41	bHLH family protein