PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc004706.1_g020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | WRKY | ||||||||
Protein Properties | Length: 321aa MW: 36615.9 Da PI: 5.9965 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 72.3 | 6.7e-23 | 131 | 191 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 dDgy+WrKYGqK++ ++++ r+Y+rCt++ gC+++k+v++ +++p ++tY+g+H+++ Cse_sc004706.1_g020.1 131 DDGYAWRKYGQKPILNAKYQRNYFRCTHKgdqGCQATKQVQKIDDEPPKYVTTYNGHHTCK 191 8***************************99999**************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 321 aa Download sequence |
MESSSWPGSL PCNHIKAIQE LTRGQQLTNK LREMLGQQEK IESDFKLVDG VVDEIKGMFD 60 NTLSILNSYT FNEKPHIQTH DMRCQSSVDD QQSHDSGESE KSVRSVKNRR GCYKRGRTSS 120 TSTKVTSTLI DDGYAWRKYG QKPILNAKYQ RNYFRCTHKG DQGCQATKQV QKIDDEPPKY 180 VTTYNGHHTC KNLQTAFHII LDTPNLRDNL FLLNFETSTP TENKQASPCL ISMKQTPKED 240 LPSLCMENEQ ASSCNNYTPW DPITELSQVS FEPVSMIPSG FDHVDMISSE TFSYTCSTDC 300 YKIDHMIGSN DFGELLYEFC Q |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56400.1 | 3e-33 | WRKY family protein |