PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc004673.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family bHLH
Protein Properties Length: 314aa    MW: 33969.6 Da    PI: 8.7446
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc004673.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.48.3e-11249294655
                            HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                    HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                            +++Er RR ri  ++ +L++l+P+     +k  s +++L +Av++Ik Lq
  Cse_sc004673.1_g010.1 249 SIAERERRTRISGKLKKLQDLVPNM----DKQTSYSDMLDLAVQHIKGLQ 294
                            689*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MYPSSNSSTS RDPNNINNTT NGDTNVNQQG IGLARYRSAP VSFLTTTVDS VINGQSQQQS  60
TVGNHMSGGG GTPTRFFSPP DSTSSQLSSV SNNTNIGDRL QTTSFRLNEF ATAFNGMKST  120
SSQTQNPSPL FRHGSSPAGF LNTLVSSTPT DGRGSRLGSQ LSFTGTNSYS RLSEEPDIAN  180
SLVFSSSSSH NKRAKIDVNG LNIMESELNF GLSESALEAA AMEKMMDLPH DSVPCKIRAK  240
RGCATHPRSI AERERRTRIS GKLKKLQDLV PNMDKQTSYS DMLDLAVQHI KGLQTHVQNL  300
HNELQNCTCG CKPE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05805.14e-57bHLH family protein