PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc004633.1_g050.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

NAC

Protein Properties

Length: 507aa MW: 56883.4 Da PI: 5.0865

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc004633.1_g050.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	172.5	1.3e-53	35	166	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkat 86 lp GfrF+Ptdeel+++yL++k++g++ ++ ++i+e+d++k+ePwdLp + +k+++ ew+fF++rd+ky++g+r+nrat++gyWkat Cse_sc004633.1_g050.1 35 LPLGFRFRPTDEELINYYLRQKINGHHSDV-HIIPEIDVCKLEPWDLPeQsVIKTDDPEWFFFCPRDRKYPNGHRSNRATSAGYWKAT 121 699**********************999.89**********95347777888************************** PP NAM 87 gkdkevlsk...kgelvglkktLvfykgrapkgektdWvmheyrl 128 gkd++++s+ + + +g+kktLvfy+grapkge+t+W+mheyr+ Cse_sc004633.1_g050.1 122 GKDRTIKSRsrsDVKIIGMKKTLVFYRGRAPKGERTHWIMHEYRA 166 ****86555566*************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 507 aa Download sequence
STTTVPKANF FSSHLFHFHT HTKNTHTHID PMDSLPLGFR FRPTDEELIN YYLRQKINGH 60 HSDVHIIPEI DVCKLEPWDL PEQSVIKTDD PEWFFFCPRD RKYPNGHRSN RATSAGYWKA 120 TGKDRTIKSR SRSDVKIIGM KKTLVFYRGR APKGERTHWI MHEYRALGKD LDGTNPGQAA 180 YVLCRLFRKT EETIDASKYD EAEPSSFSPT AQKSEDASLD LLEGPSIQDA QTDETERWLT 240 DTADNSTHNA IVSSEPMIPN VDKTITEPPD FGASLDLRFA NDFGNDNNGL EFQDGTSEPD 300 VALSELLSLI QNNNESYFKE SYSQMSTTVR TETPISGPVQ TCISASVVGS LSKMENDLEP 360 STSGTNVPDM GSSSRVRPDI KFRTRQFQVD QNSENIMGQG NASRRLRLLI EPSSGSAGHT 420 DDQEETSSTA SEVCDNFEDS QTCDASKDPA QGDDQRLRLQ MKPSMLVKAY CGGHFLTSPL 480 IQILSLFLVI LVMFISLGIP ECPMFRL

Sequence ? help Back to Top

Protein Sequence Length: 507 aa Download sequence

STTTVPKANF FSSHLFHFHT HTKNTHTHID PMDSLPLGFR FRPTDEELIN YYLRQKINGH  60
HSDVHIIPEI DVCKLEPWDL PEQSVIKTDD PEWFFFCPRD RKYPNGHRSN RATSAGYWKA  120
TGKDRTIKSR SRSDVKIIGM KKTLVFYRGR APKGERTHWI MHEYRALGKD LDGTNPGQAA  180
YVLCRLFRKT EETIDASKYD EAEPSSFSPT AQKSEDASLD LLEGPSIQDA QTDETERWLT  240
DTADNSTHNA IVSSEPMIPN VDKTITEPPD FGASLDLRFA NDFGNDNNGL EFQDGTSEPD  300
VALSELLSLI QNNNESYFKE SYSQMSTTVR TETPISGPVQ TCISASVVGS LSKMENDLEP  360
STSGTNVPDM GSSSRVRPDI KFRTRQFQVD QNSENIMGQG NASRRLRLLI EPSSGSAGHT  420
DDQEETSSTA SEVCDNFEDS QTCDASKDPA QGDDQRLRLQ MKPSMLVKAY CGGHFLTSPL  480
IQILSLFLVI LVMFISLGIP ECPMFRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35580.3	1e-108	NAC family protein