PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc004592.1_g050.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 353aa    MW: 40652.5 Da    PI: 7.088
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc004592.1_g050.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1301.7e-0963115156
                   FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...tekerrtra 56 
                            +fY+eYA+e+GF++rk  +k+ ++ g    + f+Cs+eg + + k++   t       +
  Cse_sc004592.1_g050.1  63 QFYKEYAREAGFEIRKGGQKNGEKIGYPSVKYFYCSREGLKPPPKTDklqT------DM 115
                            6***************************************99988883331......22 PP
Sequence ? help Back to Top
Protein Sequence    Length: 353 aa     Download sequence    
MQLRGEASQS TNIVQDNVDV DAQTVPQVGS YQPTPPGSKF WIPEAKKKPV EGTKFDTLEL  60
ALQFYKEYAR EAGFEIRKGG QKNGEKIGYP SVKYFYCSRE GLKPPPKTDK LQTDMSKSDN  120
IEAVTRVDKT LIGLFWADEQ AKLNYDAFGD VVLFDATFRS NMYNMVLVPF TGIDNHNRCI  180
LFGVALLASE AAKRYTWLFN SFKKIFGSVP KVVVTDQDPA MKISIEKVFT ESRHRLFMWH  240
IMQKLTDKVG PALCSNTNFK QRLCDIVWTD QIDPDMFESE WKSIMDDFKL NEKKWLSDMF  300
EMRTKWIHAY FRHEPMSEPM CTTSRSESEN HFLGQITNPL STCLLNVWFN AIA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-37FAR1 family protein