PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc004564.1_g030.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 835aa    MW: 95672.6 Da    PI: 8.8983
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc004564.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1522.4e-16126219390
                   FAR1   3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtklel 83 
                            Y +YA+++GF vrks +k+  ++g ++++ +vC++eg ++  + +      ++k++r+++ + tgCka+++ ++   + k+++t +++
  Cse_sc004564.1_g030.1 126 YMKYASKAGFVVRKSCQKRL-MSGIVKQKYLVCNREGCPKGIHVDtldlenSDKQKRSSNLHITGCKARVMFELIPgSRKYKLTVFDS 212
                            99************988887.8999*************99988888999888899999999***************9*********** PP

                   FAR1  84 eHnHela 90 
                             HnHel 
  Cse_sc004564.1_g030.1 213 IHNHELE 219
                            *****96 PP

Sequence ? help Back to Top
Protein Sequence    Length: 835 aa     Download sequence    
MDSIPNSSVS SNRSSSSKEI GATELSTTEF APENVVVSII ESATEDIVVS DDVSAKYTEE  60
IVAYEHGDES AAIKKLNALK TPESFSTHSN FDTPGGTVYY IPKVPVDVLL AKGNVFNSVD  120
ECISAYMKYA SKAGFVVRKS CQKRLMSGIV KQKYLVCNRE GCPKGIHVDT LDLENSDKQK  180
RSSNLHITGC KARVMFELIP GSRKYKLTVF DSIHNHELER KEYKHLSKTE RQLTYVEQLF  240
IVKVASVNIG ATRAHHLLTG LKGSYLLVHG TAVDFKNFFR SVNCYIGDSD AQMLIAKMEN  300
RKKHVPDFSF DYLVENAELS AIFWADEVSK YNYKEFCDVV SFDATYRTNK YKMMFVPFTA  360
IDNHRKCVTV AAGLLKNETA NSYIWLLKAF IKAFGKAPSI VVTDQDGAMR KAMEQEFSGS  420
KHRLCMWHIT QKLPGKICSK IYDHTDFKRK FNQIVWNMYI GPDEFDYQWG KLLDEFNLHN  480
HKWLTKMFRI RSCWIPAFFV DSPLCGLMRT TSRSESENSF FSHFTNSGST LMNFMNYFET  540
AMEKHRHIQE RLDHKSIDSV PILRTYLKIE RHASKVYTRP LFEMVQAELF AGTWFCQIDT  600
KSLAEGSEVS VIKEKKFVDE LMEKKKAKKK EKFKKKGDDN DKNKDREEPI NLFHKEDGLY  660
KNANVEMIPN QYILRRWTKN LIPAGLRNKR MNMYGEKNEI VENYANKATS IVDHCVHILS  720
KDETRLDAFI EKLKLLKLDV EVDCLNPPSK HKLDNLEELV GVPKPHVVAV KNPYGCKPKG  780
REKSRIKGGK EQAIDESSIN RDSCSMCRAI DGHNKRTCLN KYRVEDDLVQ SQATS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.11e-67FAR1 family protein