PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc004564.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 835aa MW: 95672.6 Da PI: 8.8983

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc004564.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	52	2.4e-16	126	219	3	90
FAR1 3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtklel 83 Y +YA+++GF vrks +k+ ++g ++++ +vC++eg ++ + + ++k++r+++ + tgCka+++ ++ + k+++t +++ Cse_sc004564.1_g030.1 126 YMKYASKAGFVVRKSCQKRL-MSGIVKQKYLVCNREGCPKGIHVDtldlenSDKQKRSSNLHITGCKARVMFELIPgSRKYKLTVFDS 212 99**********988887.8999*********99988888999888899999999***********9******* PP FAR1 84 eHnHela 90 HnHel Cse_sc004564.1_g030.1 213 IHNHELE 219 ***96 PP

Sequence ? help Back to Top
Protein Sequence Length: 835 aa Download sequence
MDSIPNSSVS SNRSSSSKEI GATELSTTEF APENVVVSII ESATEDIVVS DDVSAKYTEE 60 IVAYEHGDES AAIKKLNALK TPESFSTHSN FDTPGGTVYY IPKVPVDVLL AKGNVFNSVD 120 ECISAYMKYA SKAGFVVRKS CQKRLMSGIV KQKYLVCNRE GCPKGIHVDT LDLENSDKQK 180 RSSNLHITGC KARVMFELIP GSRKYKLTVF DSIHNHELER KEYKHLSKTE RQLTYVEQLF 240 IVKVASVNIG ATRAHHLLTG LKGSYLLVHG TAVDFKNFFR SVNCYIGDSD AQMLIAKMEN 300 RKKHVPDFSF DYLVENAELS AIFWADEVSK YNYKEFCDVV SFDATYRTNK YKMMFVPFTA 360 IDNHRKCVTV AAGLLKNETA NSYIWLLKAF IKAFGKAPSI VVTDQDGAMR KAMEQEFSGS 420 KHRLCMWHIT QKLPGKICSK IYDHTDFKRK FNQIVWNMYI GPDEFDYQWG KLLDEFNLHN 480 HKWLTKMFRI RSCWIPAFFV DSPLCGLMRT TSRSESENSF FSHFTNSGST LMNFMNYFET 540 AMEKHRHIQE RLDHKSIDSV PILRTYLKIE RHASKVYTRP LFEMVQAELF AGTWFCQIDT 600 KSLAEGSEVS VIKEKKFVDE LMEKKKAKKK EKFKKKGDDN DKNKDREEPI NLFHKEDGLY 660 KNANVEMIPN QYILRRWTKN LIPAGLRNKR MNMYGEKNEI VENYANKATS IVDHCVHILS 720 KDETRLDAFI EKLKLLKLDV EVDCLNPPSK HKLDNLEELV GVPKPHVVAV KNPYGCKPKG 780 REKSRIKGGK EQAIDESSIN RDSCSMCRAI DGHNKRTCLN KYRVEDDLVQ SQATS

Sequence ? help Back to Top

Protein Sequence Length: 835 aa Download sequence

MDSIPNSSVS SNRSSSSKEI GATELSTTEF APENVVVSII ESATEDIVVS DDVSAKYTEE  60
IVAYEHGDES AAIKKLNALK TPESFSTHSN FDTPGGTVYY IPKVPVDVLL AKGNVFNSVD  120
ECISAYMKYA SKAGFVVRKS CQKRLMSGIV KQKYLVCNRE GCPKGIHVDT LDLENSDKQK  180
RSSNLHITGC KARVMFELIP GSRKYKLTVF DSIHNHELER KEYKHLSKTE RQLTYVEQLF  240
IVKVASVNIG ATRAHHLLTG LKGSYLLVHG TAVDFKNFFR SVNCYIGDSD AQMLIAKMEN  300
RKKHVPDFSF DYLVENAELS AIFWADEVSK YNYKEFCDVV SFDATYRTNK YKMMFVPFTA  360
IDNHRKCVTV AAGLLKNETA NSYIWLLKAF IKAFGKAPSI VVTDQDGAMR KAMEQEFSGS  420
KHRLCMWHIT QKLPGKICSK IYDHTDFKRK FNQIVWNMYI GPDEFDYQWG KLLDEFNLHN  480
HKWLTKMFRI RSCWIPAFFV DSPLCGLMRT TSRSESENSF FSHFTNSGST LMNFMNYFET  540
AMEKHRHIQE RLDHKSIDSV PILRTYLKIE RHASKVYTRP LFEMVQAELF AGTWFCQIDT  600
KSLAEGSEVS VIKEKKFVDE LMEKKKAKKK EKFKKKGDDN DKNKDREEPI NLFHKEDGLY  660
KNANVEMIPN QYILRRWTKN LIPAGLRNKR MNMYGEKNEI VENYANKATS IVDHCVHILS  720
KDETRLDAFI EKLKLLKLDV EVDCLNPPSK HKLDNLEELV GVPKPHVVAV KNPYGCKPKG  780
REKSRIKGGK EQAIDESSIN RDSCSMCRAI DGHNKRTCLN KYRVEDDLVQ SQATS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-67	FAR1 family protein