PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc004540.1_g090.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NAC
Protein Properties Length: 314aa    MW: 36555 Da    PI: 6.1959
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc004540.1_g090.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM160.46.8e-50211551128
                    NAM   1 lppGfrFhPtdeelvveyLkkkvegkk.....lelee...vikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratks 80 
                            lppGfrFhPtdeel+v+yL +k ++ +         +   +i++vd+yk+ePwdLp+ +  ++kewyfF++r++ky++g+r+nr+t +
  Cse_sc004540.1_g090.1  21 LPPGFRFHPTDEELIVHYLSHKSRSMEpltsvA---SppsIIADVDLYKHEPWDLPELALFGTKEWYFFTPRERKYPNGSRPNRVTGN 105
                            79*********************9999775542...14438***************76667899************************ PP

                    NAM  81 gyWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                            gyWkatg dk+++sk   + +vg++k Lvfy g+  kg kt+W+mheyrl
  Cse_sc004540.1_g090.1 106 GYWKATGADKPIKSKsdPKVTVGIRKALVFYAGKGTKGIKTNWIMHEYRL 155
                            **************9666677***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MRTPTKHVTK TVRDAEAELN LPPGFRFHPT DEELIVHYLS HKSRSMEPLT SVASPPSIIA  60
DVDLYKHEPW DLPELALFGT KEWYFFTPRE RKYPNGSRPN RVTGNGYWKA TGADKPIKSK  120
SDPKVTVGIR KALVFYAGKG TKGIKTNWIM HEYRLNKHSK LDDWVLCRLY NKKNNPKEII  180
IPHEDDSMRH SHDLHVTSPL DELQSGQSYS DISDNLDTFE YSNGEFSCKS EDDVIFLDDL  240
RRPQVKNTSE RRDTGLMESL MQKEDFEDGN EWLDSLSLED LHNYLEAIPS NHDIYEMPMM  300
YHQPNHQHFF QLGF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08790.12e-73NAC family protein