PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc004540.1_g070.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | NAC | ||||||||
Protein Properties | Length: 659aa MW: 76521.5 Da PI: 5.9022 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 131.6 | 5.7e-41 | 21 | 154 | 1 | 127 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.....leleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyW 83 lppGfrFhPtdeel+ +yL++k ++ + + ++i++vd+yk+ePw+Lp+ + ++kewyfF++rd+ + ++gyW Cse_sc004540.1_g070.1 21 LPPGFRFHPTDEELIIHYLCHKSRSMEpfasvASPPSIIADVDLYKHEPWELPELAMFGTKEWYFFTPRDTFIGLPSSGLAHCRNGYW 108 79*********************999977654222348***************76667899***********9977777777889*** PP NAM 84 katgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyr 127 katg dk+++sk + +vg+kk Lvfy g+ kg kt+W+mheyr Cse_sc004540.1_g070.1 109 KATGADKPIKSKsdPKVTVGIKKALVFYAGKGTKGIKTNWIMHEYR 154 ***********9666677***************************8 PP | |||||||
2 | NAM | 158.5 | 2.6e-49 | 321 | 454 | 1 | 127 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.....lelee...vikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratks 80 lppGfrFhPtdeel+v+yL +k ++ + + +i++vd+yk+ePw+Lp+ + ++kewyfF++rd+ky++g+r+nr+t + Cse_sc004540.1_g070.1 321 LPPGFRFHPTDEELIVHYLSHKSRSMEpftsvA---SppsIIADVDLYKHEPWELPELAMFGTKEWYFFTPRDRKYPNGSRPNRVTGN 405 79*********************9999775542...14438***************76667899************************ PP NAM 81 gyWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyr 127 gyWkatg dk+++sk + +vg+kk Lvfy g+ kg kt+W+mheyr Cse_sc004540.1_g070.1 406 GYWKATGADKPIKSKsdPKVTVGIKKALVFYAGKGTKGIKTNWIMHEYR 454 **************9666677***************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 659 aa Download sequence |
MRTPTKHVTK TARDAEAELN LPPGFRFHPT DEELIIHYLC HKSRSMEPFA SVASPPSIIA 60 DVDLYKHEPW ELPELAMFGT KEWYFFTPRD TFIGLPSSGL AHCRNGYWKA TGADKPIKSK 120 SDPKVTVGIK KALVFYAGKG TKGIKTNWIM HEYRRNKHSK LDDWVLCRLY NKKNNPKEMI 180 IPQEDDSICH SNDLRVTSPL DELQSGQSYS DISDNLDSFE YSDGEFSCKN EVDVMFLDDL 240 RRPQVKDTIE RHDTGLMESL MQKEDFEDGN EWFDSLSLED MHHCLEAIPS NHDIYEMPMM 300 YQPNHQHFFQ LARDAEAELN LPPGFRFHPT DEELIVHYLS HKSRSMEPFT SVASPPSIIA 360 DVDLYKHEPW ELPELAMFGT KEWYFFTPRD RKYPNGSRPN RVTGNGYWKA TGADKPIKSK 420 SDPKVTVGIK KALVFYAGKG TKGIKTNWIM HEYRHPAPSK LDDWVLCRLY NKKNNPKEMI 480 IPQEDNSICH SNDLRVTSPL DELQSGQSYS EISDNLDTFE YSDVEFSCKN EDNVIFLNDL 540 RPQVKSNSER RDTGLMESLM QKEELDDGNE WLDGLSLEDL HHCLEAIPSN HDIYEMPMMY 600 HQPNHQHFFQ LGILFIHVNI IGFLRSVYIF LFNILEKYRC NKICSHMYKD FVNIHILVP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G08790.1 | 8e-68 | NAC family protein |