PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc004507.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

Protein Properties

Length: 954aa MW: 105005 Da PI: 8.2448

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc004507.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	42.4	1.2e-13	239	338	1	98
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE...EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy.rkksgr.yvltkGWkeFvkangLkegDfvvFkl 84 f+kvlt d++ks++lvlpkk+ae+ +++ ees +++ +d++g+ W++k++ k++gr yvl + +a +L gD+v+F++ Cse_sc004507.1_g010.1 239 FEKVLTATDTGKSRWLVLPKKCAEKLfpSINDEESEQVVCQDTQGEDWRFKFRTlPKNKGRiYVLD-EFYLYLQAMELSLGDTVTFSR 325 99*******************999778889999*************88855555636666.9999**************6 PP -SSSEE..EEEEE- CS B3 85 dgrsefelvvkvfr 98 + +++lv++ ++ Cse_sc004507.1_g010.1 326 LD-PQRKLVIGYRK 338 65.78888888776 PP

Sequence ? help Back to Top
Protein Sequence Length: 954 aa Download sequence
MFHNHKSDSE ETNDDATITR TPCANDDTTI TSNPCVNDTT ISPTTRANDN TITPAPRANG 60 DTITLTPHAI DDTTITPTPH AIDDTTITKT PRVIDGTTII ATPRANDDIT ITPTPCVNDD 120 TIITPTSRAN HNTTTITPTP RAIHDTTTIT ATPLSLEHNA SETSSKTRAS AQTREEKRQT 180 GRGHEKNVPY RYAPRMTNLQ VEEIKRGCVG ENYQTVIGLG EEEIQEVPEE PTVILIPLFE 240 KVLTATDTGK SRWLVLPKKC AEKLFPSIND EESEQVVCQD TQGEDWRFKF RTLPKNKGRI 300 YVLDEFYLYL QAMELSLGDT VTFSRLDPQR KLVIGYRKNS SESPSNHLPR GAIASMSRVR 360 DTRINNVDGD KGKNKSAMPS MVSQGELNAF PRVESDLVAP QVPLFARKKS VEVGSTSNSS 420 RKKHKLSEVD TPNEAQEHVS SDHGGNGPFV AAANGVKIKS KKVAKGKPDA SASGQSSDIV 480 ATNVPASAKR KHFEVGSTSQ RNQQKRKLSE VDVIVTEVQE PVPSPCCRDG TFELVANGVT 540 LKCTKTLERM IREMLNEQGH LVTGNQNATS PSLASQDKAE TSTRKKKSKG KNSLLTLANI 600 CKGKAIDSIS TPPNMVPAEP PVRAKGKHIE IGSTSHSADR IRKISAFDPT LKESTEPRAP 660 PSSKKTKTRN LEPEPQATVE ARVAPEPSNV TKKHPRHRTG CQCIICIQPP SGSKHSSTCP 720 CPSCIAKRLR VKNMKEKVSQ KPSIRRQRKV QEPAEPSNHQ IARVSRGSDE NQVERREPSP 780 SPAEPSNQQT ITVRSGSEEN QNEGRELSQS AEPSNQQTIT VSSGLEENQN ERIIEPPQSA 840 EHPDVQTITV KHDSEENQNE QRLTDNFVRR LQDERESGEG WLDGVVWWLV VAKCPRKSGE 900 GDSPRYLQAS FSTIRKSSAK SLLRIAACVA EQVIGLHGVD IQVTELQSVF QCYY

Sequence ? help Back to Top

Protein Sequence Length: 954 aa Download sequence

MFHNHKSDSE ETNDDATITR TPCANDDTTI TSNPCVNDTT ISPTTRANDN TITPAPRANG  60
DTITLTPHAI DDTTITPTPH AIDDTTITKT PRVIDGTTII ATPRANDDIT ITPTPCVNDD  120
TIITPTSRAN HNTTTITPTP RAIHDTTTIT ATPLSLEHNA SETSSKTRAS AQTREEKRQT  180
GRGHEKNVPY RYAPRMTNLQ VEEIKRGCVG ENYQTVIGLG EEEIQEVPEE PTVILIPLFE  240
KVLTATDTGK SRWLVLPKKC AEKLFPSIND EESEQVVCQD TQGEDWRFKF RTLPKNKGRI  300
YVLDEFYLYL QAMELSLGDT VTFSRLDPQR KLVIGYRKNS SESPSNHLPR GAIASMSRVR  360
DTRINNVDGD KGKNKSAMPS MVSQGELNAF PRVESDLVAP QVPLFARKKS VEVGSTSNSS  420
RKKHKLSEVD TPNEAQEHVS SDHGGNGPFV AAANGVKIKS KKVAKGKPDA SASGQSSDIV  480
ATNVPASAKR KHFEVGSTSQ RNQQKRKLSE VDVIVTEVQE PVPSPCCRDG TFELVANGVT  540
LKCTKTLERM IREMLNEQGH LVTGNQNATS PSLASQDKAE TSTRKKKSKG KNSLLTLANI  600
CKGKAIDSIS TPPNMVPAEP PVRAKGKHIE IGSTSHSADR IRKISAFDPT LKESTEPRAP  660
PSSKKTKTRN LEPEPQATVE ARVAPEPSNV TKKHPRHRTG CQCIICIQPP SGSKHSSTCP  720
CPSCIAKRLR VKNMKEKVSQ KPSIRRQRKV QEPAEPSNHQ IARVSRGSDE NQVERREPSP  780
SPAEPSNQQT ITVRSGSEEN QNEGRELSQS AEPSNQQTIT VSSGLEENQN ERIIEPPQSA  840
EHPDVQTITV KHDSEENQNE QRLTDNFVRR LQDERESGEG WLDGVVWWLV VAKCPRKSGE  900
GDSPRYLQAS FSTIRKSSAK SLLRIAACVA EQVIGLHGVD IQVTELQSVF QCYY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G21550.1	5e-30	B3 family protein