PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc004497.1_g050.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | MYB | ||||||||
Protein Properties | Length: 303aa MW: 33893.8 Da PI: 5.2358 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 48.2 | 2.5e-15 | 15 | 60 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+WT+eEd +l+++v+ +G ++W+ I ++ gR k+c++rw + Cse_sc004497.1_g050.1 15 KGSWTPEEDAKLIQLVETHGARNWSVIWLSIP-GRFSKSCRLRWCNQ 60 799*****************************.***********985 PP | |||||||
2 | Myb_DNA-binding | 48.4 | 2.2e-15 | 69 | 111 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T+ Ed+ +++a+ +G++ W+ I++ ++ gRt++ +k++w++ Cse_sc004497.1_g050.1 69 PFTPHEDDFILRAHVIHGNK-WSVISKLLP-GRTDNAIKNHWNST 111 89******************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 303 aa Download sequence |
MMSSSNDDVN LLKKKGSWTP EEDAKLIQLV ETHGARNWSV IWLSIPGRFS KSCRLRWCNQ 60 LSPNVQHRPF TPHEDDFILR AHVIHGNKWS VISKLLPGRT DNAIKNHWNS TLSCDGMSVL 120 TLLPPGNGEK KKRGDDEVEK EIEDTCLVDV MRKMIAKEVR SYIDELRAKD GLSFGPVLSH 180 ESDSSSKGKE KMVQVLAERE VAGKKIEWAM FVMVYVVLSN PNNAFAGCYR PTFPNSITCP 240 GSSSNYVMPP PDLNQYNSQN NPHLGQNDHV DNNDLNNNDD NSEDNNEAGD ESGSDSGGGF 300 FEE |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 130 | 157 | KKKRGDDEVEKEIEDTCLVDVMRKMIAK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37260.1 | 4e-45 | MYB family protein |