PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc004378.1_g060.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

G2-like

Protein Properties

Length: 389aa MW: 43136.3 Da PI: 5.5081

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc004378.1_g060.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	103	1.9e-32	250	305	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W++eLH+rFv+a++qLGGs+ AtPk+i+elm+v+gLt+++vkSHLQkYRl+ Cse_sc004378.1_g060.1 250 KQRRCWSSELHRRFVNALQQLGGSQAATPKQIRELMQVDGLTNDEVKSHLQKYRLH 305 79****************************************************97 PP
2	Myb_DNA-binding	44	5e-14	252	303	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e++ ++v+a +qlGg t+k I + m+ g+t ++ks++qky+ Cse_sc004378.1_g060.1 252 RRCWSSELHRRFVNALQQLGGSqaaTPKQIRELMQvDGLTNDEVKSHLQKYR 303 568***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 389 aa Download sequence
MGSLNPPPEL SLNFQPSTFI PKTITQFLHQ LSNNGSLSDK IIKIDDFIDG LESEMRKIDA 60 FKRELPLCMV LINDAIVALK DEVMLLRKSA KLANSGPVLE EFIPIKKRCD EDEEVDLIRK 120 DNGDKKNWLS STQLWNADEN SSDIIEKRKQ DSLDQINKKK SFEEVLYQPY TNPGLYKGCG 180 GITMMDTRQE FSVPDLSLIT PGIDNSARGG FVLAKSSTDS NLVSSAPNGQ SNERADVPQY 240 QPPHQQTSRK QRRCWSSELH RRFVNALQQL GGSQAATPKQ IRELMQVDGL TNDEVKSHLQ 300 KYRLHTRRLP SSNTSSANQS GVGLGGGLWM SPQDQYVESS KQGISQSGSP DGPLLIGTTG 360 GTSTTGDNSM DDGEDTKSEN YCWKGHLDV

Sequence ? help Back to Top

Protein Sequence Length: 389 aa Download sequence

MGSLNPPPEL SLNFQPSTFI PKTITQFLHQ LSNNGSLSDK IIKIDDFIDG LESEMRKIDA  60
FKRELPLCMV LINDAIVALK DEVMLLRKSA KLANSGPVLE EFIPIKKRCD EDEEVDLIRK  120
DNGDKKNWLS STQLWNADEN SSDIIEKRKQ DSLDQINKKK SFEEVLYQPY TNPGLYKGCG  180
GITMMDTRQE FSVPDLSLIT PGIDNSARGG FVLAKSSTDS NLVSSAPNGQ SNERADVPQY  240
QPPHQQTSRK QRRCWSSELH RRFVNALQQL GGSQAATPKQ IRELMQVDGL TNDEVKSHLQ  300
KYRLHTRRLP SSNTSSANQS GVGLGGGLWM SPQDQYVESS KQGISQSGSP DGPLLIGTTG  360
GTSTTGDNSM DDGEDTKSEN YCWKGHLDV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03500.1	2e-54	G2-like family protein