PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc004370.1_g060.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

DBB

Protein Properties

Length: 268aa MW: 29385.2 Da PI: 6.5913

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc004370.1_g060.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	20.1	1.3e-06	4	45	5	40
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvv 40 C+ +e e++ C ++ lC++C +++H H++v Cse_sc004370.1_g060.1 4 QCSVCETAEATVLCCADEAALCRSCDVKIHAAnklaskHQRV 45 7****99*******************666777778765 PP
2	zf-B_box	28.7	2.7e-09	53	86	2	35
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHk 35 +++kC+ ++e +fC +++ llC++C +++H Cse_sc004370.1_g060.1 53 KMPKCDICQETFGYFFCLEDRALLCRKCDVAIHT 86 689*****99*******************3 PP

Sequence ? help Back to Top
Protein Sequence Length: 268 aa Download sequence
MKIQCSVCET AEATVLCCAD EAALCRSCDV KIHAANKLAS KHQRVVLTNS DAKMPKCDIC 60 QETFGYFFCL EDRALLCRKC DVAIHTVNAF VSSHQRFLLT GVKVGAEAAD LDTSSTSNKS 120 NATKNSVLLS PTVQYNNPVP VQAAPSLPST GGSSVNDIQQ WQFDEFLGLT DVNQNYNYIE 180 NVSSKVDKGK VRHSDCSPIL RAMEAELDEC LGQVPESSWA VPQICSPPTA SGLCWLKSHD 240 NLHQFDAAAF VPDVCYRQST TSLKRRRQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78600.1	2e-79	DBB family protein