PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc004365.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

bHLH

Protein Properties

Length: 319aa MW: 35766.8 Da PI: 7.3021

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc004365.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	33.7	6.6e-11	144	190	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h +Er+RR+++ ++f L l+P + kK++Ka++L A++++k Lq Cse_sc004365.1_g010.1 144 DHILAERKRREKLSQRFIALSALVPGL-----KKMDKASVLGDAIKHMKTLQ 190 5899*********************.....9****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 319 aa Download sequence
MAVSNLRGFS ELIAMDDPSS FDFQSLVNSY DDHLDPMGIA VNSFDANVGV FNYYKPVMEP 60 SSRPTKQIKT SSWNSSCVTN EHSLMNVNMS QQANLVTPKE ETTVSSKING FQFGPYMKSD 120 FDNGYHGGVV DGAKNRTKVS HAQDHILAER KRREKLSQRF IALSALVPGL KKMDKASVLG 180 DAIKHMKTLQ EKVKTLEDQI NKRPNTESVV FVKRYEVSAD NGESSSSNDG PIHEQLPEIE 240 ARFFANDVLI RIHCEKKSGV LEKILAEIEK LHLSVLNSTC MTFANYALDI TVMAQLDKEF 300 AMTMKDLMKN LRSALKQFV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	149	154	ERKRRE
2	150	155	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37850.1	2e-62	bHLH family protein