PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc004358.1_g020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | MYB_related | ||||||||
Protein Properties | Length: 195aa MW: 21695.2 Da PI: 11.1253 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 45.5 | 1.8e-14 | 91 | 135 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ l++ + ++ G+g+W+ I+r + k+Rt+ q+ s+ qky Cse_sc004358.1_g020.1 91 AWTEEEHRLFLVGLHKVGKGDWRGISRNFVKTRTPTQVASHAQKY 135 7*******************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 195 aa Download sequence |
MATMPSHSFD SNGGSATSSS VNNTGKTIML FGVKLTDGGG GTFSFRKSAS MNNLAQFDHQ 60 HRDSSVNMAG YASDNVIHPS APSHDRKKGV AWTEEEHRLF LVGLHKVGKG DWRGISRNFV 120 KTRTPTQVAS HAQKYFLRRN NHNRRRRRSS LFDITTETVV TSAYGFISGI SATTTKYRKQ 180 EGKTHHAIFF GHYKS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G70000.2 | 3e-56 | MYB_related family protein |