PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc004331.1_g040.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 318aa    MW: 36238.7 Da    PI: 4.8379
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc004331.1_g040.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.91.9e-1684131253
                    AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkl 53 
                            +y+GVr++k +g+W+AeIr p       kr +lg+f ta+eA  a++  ++++
  Cse_sc004331.1_g040.1  84 KYRGVRQRK-WGKWAAEIRNPF----EgKRLWLGTFNTAKEASIAYEIKKLEF 131
                            8*******9.**********64....35******************9988876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
MRTIRIILRD PDMTDDSSDD EANKKPKSKT IVREIKIPMV SFSDTYESFQ NSNNGMRNLG  60
EKRRGLARTS SQPRVTRTSD GLLKYRGVRQ RKWGKWAAEI RNPFEGKRLW LGTFNTAKEA  120
SIAYEIKKLE FDKMAASLTG SVKRNNRKKN KRKPLVMGST GHKKQAVFVE SFGVIRQSSP  180
SSVLESQSSL VSTIFEDNDK NIETCFASNN AIDEDLFPDR GLILDPNEMT LEEIGKDLEM  240
ELGASFLDCF DGTLNEFGNV DEFNLYGFDD KLSSDLPDWD FREFDNEERA WFNALELDES  300
LMGDEQQQAL PMSFVASI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.16e-21ERF family protein