PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc004241.1_g070.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB
Protein Properties Length: 327aa    MW: 36873.3 Da    PI: 5.997
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc004241.1_g070.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.52.7e-171966148
                           TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                           +g+WT+eEd++l d+++ +G g+W++ ++  g+ R++k+c++rw +yl
  Cse_sc004241.1_g070.1 19 KGAWTPEEDQILTDYIQAHGHGSWRALPKLAGLQRCGKSCRLRWTNYL 66
                           79********************************************97 PP
2Myb_DNA-binding551.9e-1772117148
                            TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                            rg++++eE++++++++  lG++ W+tIa +++ gRt++++k++w++++
  Cse_sc004241.1_g070.1  72 RGKFSKEEEDIILHLHSVLGNK-WSTIATRLP-GRTDNEIKNYWNTHM 117
                            89********************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    
MGRCPTPTSR DDENNILKKG AWTPEEDQIL TDYIQAHGHG SWRALPKLAG LQRCGKSCRL  60
RWTNYLRPDI KRGKFSKEEE DIILHLHSVL GNKWSTIATR LPGRTDNEIK NYWNTHMKKK  120
LLHMGIDPMT HQPRTDLYSC LPQLLALANI KELLEHNQLA QNLQYFNFLL QNNTGLPTLL  180
DRTNSIPQMQ EETPSFANDF QLALNQESEE MTQFLGLNSS VTQPLHEVSI MNNLQTTNEH  240
GKARLTTVNS SSSLSSSVTN WTSMPPLIDS TTPTSTRTIN SGSLESGSAI SYGGGEGDGG  300
ASSYNWPEYL FEDSFLDRSL EEIKYDL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G34670.11e-83MYB family protein