PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc004188.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NAC
Protein Properties Length: 369aa    MW: 40704.6 Da    PI: 4.4916
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc004188.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM50.75.9e-163111724128
                    NAM  24 egkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykg 111
                            +g+ l+l +v+++vd y++ P++Lp       + wy +s +++           t +g+W++tg+  e++s +++ +gl++t+ fy+g
  Cse_sc004188.1_g020.1  31 SGHGLPL-NVLSDVDPYQFTPSNLP------ADMWYLWSGEKT----------DTVNGFWRSTGEACEIYS-TSTIIGLRNTFNFYEG 100
                            4455666.7899************9......356999987644..........3678**************.999************* PP

                    NAM 112 rapkgektdWvmheyrl 128
                            r+p+g+kt+W+m+ y++
  Cse_sc004188.1_g020.1 101 RSPDGKKTNWIMQMYTA 117
                            *************9975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 369 aa     Download sequence    
MCPPAFVSPA AELNEYSTHE DIFKLIMRLK SGHGLPLNVL SDVDPYQFTP SNLPADMWYL  60
WSGEKTDTVN GFWRSTGEAC EIYSTSTIIG LRNTFNFYEG RSPDGKKTNW IMQMYTATDK  120
CTSKPDQKAL YRVFMVDDNV SGRISKSELL AKNTDVVGGP SAMVNRSPDP PVEDFLELND  180
LVNPLSPTTN RFPDRPSGIA NRSPNLPIED YALSGDFLEM NDLDIPLSRS TSSADSSCMT  240
MSMTSEELFD LDALLGELGD DTVGTEIQDS SVKLNVSVPA KLKEVVVQPT TLESLNNGEE  300
TKICTEETSK VNSAPQNDPA DHCIASTSNG VNATPSPSSS EGSSKEEKRD RANRHKKRKM  360
MKYLCFLAF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G33060.16e-16NAC family protein