PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc004131.1_g050.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family HSF
Protein Properties Length: 465aa    MW: 51915.5 Da    PI: 4.4603
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc004131.1_g050.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind92.25.9e-29261162102
                            HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXX CS
           HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkg 89 
                            F+ k+y++++d+++++++sws+++nsf+v+d  +++  +LpkyFkh++f SFv+QLn+YgF+kv+ ++          e++++ F +g
  Cse_sc004131.1_g050.1  26 FVVKIYDLVDDPSTDNVVSWSSTNNSFIVHDLPQLKF-LLPKYFKHDKFPSFVKQLNTYGFRKVDPDR---------LEYANEGFLRG 103
                            9**********************************99.****************************99.........78********* PP

                            XXXXXXXXXXXXX CS
           HSF_DNA-bind  90 kkellekikrkks 102
                            +k+ll++i r+k 
  Cse_sc004131.1_g050.1 104 QKHLLKTIVRRKP 116
                            **********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 465 aa     Download sequence    
MEPNDAPTVP APVPVPMPTS NALPPFVVKI YDLVDDPSTD NVVSWSSTNN SFIVHDLPQL  60
KFLLPKYFKH DKFPSFVKQL NTYGFRKVDP DRLEYANEGF LRGQKHLLKT IVRRKPASGH  120
TQQSHPQTSS VGACVEVGKF GLEEEVERLK RDKNVLMQEL VRLRQQQQTT DNQMQLMAQR  180
LQVMEKNQQK MMSFFAKAVH SPGFLSHFVQ HQNDSTKLIK EGSKKRRLKQ DGVVSNGHNE  240
SPDSQIVKYQ PMITLGNSSP PSETFSERGG PGVTVQGQLF LPEVTGDQFP SFEANTDVVA  300
TSPLANGQEL PYIPDDLDMV SNDAFIGSNM VPSDIEAVAT SPLADGQELP YSPDDLDMVP  360
NDAFIGPNMH MVPSDIENFL LNTDEEWNSN LLVEMDKYIA GLEPLCDQLL QPNPEVDNIQ  420
DMDSVPPVDD YLMQGSEDKP LENASPTGQV QQLTQQMGLA PFFVY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1224229KKRRLK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32330.18e-94HSF family protein