PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc004119.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 100aa    MW: 11943.4 Da    PI: 8.7266
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc004119.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR154.63.5e-172394173
                   FAR1  1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekd 73
                           +f+ +Y  ++GF+vrk+  +k+k+ng++ +++fvC+keg r+++ ++ ++++ +raetrtgC   + +k + +
  Cse_sc004119.1_g010.1 23 QFWINYDARIGFDVRKEWINKNKNNGHMSSARFVCNKEGVRKQDIRD-SRTKYPRAETRTGCLSLMGIKYDAN 94
                           699******************************************99.999*****************98865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 100 aa     Download sequence    
MHDNFIWEPR LGMEFDTLEN AWQFWINYDA RIGFDVRKEW INKNKNNGHM SSARFVCNKE  60
GVRKQDIRDS RTKYPRAETR TGCLSLMGIK YDANDISHEK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43280.13e-14FAR1 family protein