PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc004053.1_g050.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family bHLH
Protein Properties Length: 285aa    MW: 31978.4 Da    PI: 4.7927
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc004053.1_g050.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.18.4e-05165213255
                            HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                    HLH   2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                            r++   + rrR  r+  a++ L  +lP++     + ++K +i+    +YIksLq
  Cse_sc004053.1_g050.1 165 RVTYHDANRRRKTRLTAALDALENVLPPS-----REVNKETIVDDCEDYIKSLQ 213
                            66666788*******************98.....78*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    
MDDINEHAPQ NDSDLQPYSS TLPETFGYVP QLAENTFYQQ HMVQAKDCDI YPVPQWIGEY  60
LAGNGLSNMQ EQIPYDSTGI GCSSFTEEPF LSMYNHQAEP RDINPYVNYL SQQHEEVPVN  120
NFDTTQHGIC YQKQGPNIGL DNAVQHQTNM SASTSGSGTK SGKKRVTYHD ANRRRKTRLT  180
AALDALENVL PPSREVNKET IVDDCEDYIK SLQLRLMVLS QNRLGCEPTS NHLQYLEGYG  240
HYLVHENTAT GPLDDILGKL LKENQAAATK LLESKGLFMT TSTPN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G30980.14e-11bHLH family protein