PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc004046.1_g070.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

ERF

Protein Properties

Length: 474aa MW: 54555.7 Da PI: 8.5005

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc004046.1_g070.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	45.1	2.4e-14	234	283	2	55
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +++G+r +k +g+WvAeIr+p +kr r++lg++ ++ +Aa+a++ a +l+g Cse_sc004046.1_g070.1 234 RISGIRIRK-WGKWVAEIREP---NKRSRIRLGSYSSPVGAARAYDTAVFYLRG 283 589*999.******9...336***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 474 aa Download sequence
MVVHSVAKDY LPPEFRDCIY LVIYESNDFK PNDIFKAAEL YLSDKSFPVR DQSTPDEKNM 60 LEFTDTYNEL KFYRCLFSAN KAIKQKKNEN GMSLSCMLNK LGYLSTLTIR QPFRHAMDSD 120 VKDKVMKDLD RFLERREFYC KVGKAWKRGY LLYGPPGTGK SSLIAAMENY WKFDIYDLEL 180 SSIWSNSDLR SILLATENRL KLVVEDIDCS VELHDQSETI HCDTTRKSAN SNDRISGIRI 240 RKWGKWVAEI REPNKRSRIR LGSYSSPVGA ARAYDTAVFY LRGPSARLNF PECIKSEDLL 300 LDNLSSDFIR KKAVEVGKKI EVVTLSGFLN FIDGLWSSCA DERIIIFTTN RKDKLNPALL 360 WMSTSTFHIA LRVVASVCWP PTNVLRLPQL LKVDDPDIAL SGLIDFFEVK RKKEIKQAKK 420 AKKKEDLVAK EGEEKKQVEN KETELVTKEN EAKERVVIME GECFQATEAF LREG

Sequence ? help Back to Top

Protein Sequence Length: 474 aa Download sequence

MVVHSVAKDY LPPEFRDCIY LVIYESNDFK PNDIFKAAEL YLSDKSFPVR DQSTPDEKNM  60
LEFTDTYNEL KFYRCLFSAN KAIKQKKNEN GMSLSCMLNK LGYLSTLTIR QPFRHAMDSD  120
VKDKVMKDLD RFLERREFYC KVGKAWKRGY LLYGPPGTGK SSLIAAMENY WKFDIYDLEL  180
SSIWSNSDLR SILLATENRL KLVVEDIDCS VELHDQSETI HCDTTRKSAN SNDRISGIRI  240
RKWGKWVAEI REPNKRSRIR LGSYSSPVGA ARAYDTAVFY LRGPSARLNF PECIKSEDLL  300
LDNLSSDFIR KKAVEVGKKI EVVTLSGFLN FIDGLWSSCA DERIIIFTTN RKDKLNPALL  360
WMSTSTFHIA LRVVASVCWP PTNVLRLPQL LKVDDPDIAL SGLIDFFEVK RKKEIKQAKK  420
AKKKEDLVAK EGEEKKQVEN KETELVTKEN EAKERVVIME GECFQATEAF LREG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G67190.1	4e-34	ERF family protein