PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc003952.1_g030.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | GeBP | ||||||||
Protein Properties | Length: 384aa MW: 42675.6 Da PI: 4.2572 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 109 | 3.4e-34 | 103 | 203 | 2 | 97 |
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgk.....spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskeh 84 lfqrlw++eDei lLqG d+ +++g + ++d++afy+ +k++++++++k+qlveK+rrLKkK+++ v+k +sgke +f+++h Cse_sc003952.1_g030.1 103 LFQRLWTDEDEIELLQGYYDYITTRGLmtsssHHHHDTTAFYDEIKGKLQLEFNKNQLVEKLRRLKKKYRNVVSKLASGKEYVFKSPH 190 79************************9887533445**************************************************** PP DUF573 85 dqkifelskkiWg 97 dq +fe+++kiW+ Cse_sc003952.1_g030.1 191 DQATFEIASKIWK 203 ************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 384 aa Download sequence |
MPSDDEDHND GDHFHDDDNN GNQFLNDDDD DTDLIEEDDD INLNDDEDEE EEDVNLINDD 60 EEEDDSGEVT VAVAGTPTVA APVTTVTPSA VTPSTTAVDS RRLFQRLWTD EDEIELLQGY 120 YDYITTRGLM TSSSHHHHDT TAFYDEIKGK LQLEFNKNQL VEKLRRLKKK YRNVVSKLAS 180 GKEYVFKSPH DQATFEIASK IWKDAVNNNN NFTPVVAVNG IDEDENIAFN LNENNNGDVN 240 SLEKKRPRKR SRSGGVKIEE GYVQPQQQFG HGLGMGTGMG SEGGGSRNVN ANVVEETVKS 300 CLLPLFKELV NSSANVGSRG LGSGLGGMGL DMFGGGAMSF GIGDMSDEKW RKQHILELEV 360 YSKRLELMQD QVKSRLDELK SMGS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G04930.2 | 3e-45 | GeBP family protein |