PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc003923.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

HB-other

Protein Properties

Length: 1608aa MW: 178972 Da PI: 5.0063

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc003923.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	58.2	1.4e-18	26	80	3	57
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 kR t+ qle+Le+ ++ ++yps+e r eL+k+lgL++rq ++WF+ rR kekk Cse_sc003923.1_g010.1 26 KRKMKTAFQLEVLEKTYAGEQYPSEELRGELSKQLGLSDRQLQMWFCHRRLKEKK 80 89999*************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 1608 aa Download sequence
MDGGVGGGES GGAAGGGSEG GEVKVKRKMK TAFQLEVLEK TYAGEQYPSE ELRGELSKQL 60 GLSDRQLQMW FCHRRLKEKK PQPEKRSKKV ISSSGGVGDV MMVSGEGLGG NEVGGSGGSG 120 SGSSAFGHGE RGVSRAGGSA VSGSGRVAVA ASSEMPSVKM YYESPQAVSE ARAVAFVEAQ 180 LGERLRDDGP ILGMEFDPLP PGAFGAPIVQ QNLAVRPYDA KPFDAKPVKG GIKAVHEYQF 240 LPEQPSVRSD SYERATTSQY HGSPIDAASS RAHITPNSGF GFKGPVNLLP QHGMETPTSV 300 AAHPITGIEN PFATPVTHEE AMARIARKRK SEEARIAKEV EANQKRLKKE LEKQDVLRRK 360 REEQMRKEME RHDRERRKEE ERLLREKQRE EERYQREQRR EMERRMKFLQ KESMRAEKLR 420 LKEDMRKEKE AARLKAANDR AAARRLAKES LELIDDERLE LMEIAASTKG LPSMLSLDSE 480 ALENLESLRD MLPEFPPKSV HLKRPFKFEP WTDSEENIGN LLMVWKFLIT FADVLGLWPF 540 TLDEFVQAFH DHDPRLLGEI HVALLKSIVK DIEDVAKAPS SLAANQIGPP NPGGGHPQIV 600 EGAFAWGFDI CSWQRHLNPL TWPEILRQFA LAAGYGPKLK KRNVDRELPH EENEGVDGGD 660 MISNIRSGAA AKSALAKMQA RGFSNRRSRH RLTPGTVKYA AFHVLSLEGS RGLSILDVAD 720 KIQKSGLRDL TTSKTPEASI AAALSRDTKL FERTAPSTYC LKSPYRRDPA DGEAIINAAK 780 EKIHTFKNGL LDGEEAFDAE RDDAEKEEDS DSDVPDDPEV DDIGIISVSG VQSETVGDIK 840 VESLVDQPNI GVNHLTKKGV AAPDEDAVVD ESISGEVWVQ GLMEGEYSDL TVEERLNALV 900 ALISVANEGN SIRVLLEERL ETAMAIKKQM LADAQVDRRR MREEFMIKIQ YPSVDDRMDY 960 MSNNQQENVG DLHDDLGNLN ERLLEPAYAA EKTRAQLKFF ISHKAEELFV YRSLPLGQDR 1020 RRNRYWQFIT SASQNDPGCG RIFVELCDGR WRLIDNEESF NVLLASLDVR GNREAQLHSM 1080 LQRIEARFKE SVSKMWVNVP EAGPMGSGSP SSTVSLPKTD ASEFSSTFAI EHGRNGDEMT 1140 NAIKRYQSFE KWMWRECLNL WAMKFGSTRC ENILEVCDNC LDLSFFENGQ CSSCHKLCET 1200 FFGSNLAFSK HLSRFKEKLK SESVLCFHDR ESGHPVRFRL IKALLALIEA SVPLEALQPS 1260 WTDECRKAWC VKLVNAVTVD ALLEALTLLE SSIKRDYLSL DFETTDELLG SDNSAALLAS 1320 KDCSTVSVLP WLPETTSSVA LRLMELDTSL YYLLSQKEDA EKDKEATNVL ILHPKFAAAM 1380 KNGEEGDQGE SLYGSGNLHD PWADPVTSGR GRGRGRGRGR SRGGRSQRSV AASGSRSNAK 1440 GRPRGRGGRK RGRRGGQTKP HNTVQITEHD SSRDYLYEES PVLGFQDWNA EEIADLHATE 1500 NASSSEYEIE NENENAGVDE YDDDMMVDDG YHQKAYNNIP SREYIGEYDL EEDDEVMDEY 1560 EDEDEQAGVD VDGFFNDDAD ENRDLDVGGG HVGNPGDETE LSSSGYSD

Sequence ? help Back to Top

Protein Sequence Length: 1608 aa Download sequence

MDGGVGGGES GGAAGGGSEG GEVKVKRKMK TAFQLEVLEK TYAGEQYPSE ELRGELSKQL  60
GLSDRQLQMW FCHRRLKEKK PQPEKRSKKV ISSSGGVGDV MMVSGEGLGG NEVGGSGGSG  120
SGSSAFGHGE RGVSRAGGSA VSGSGRVAVA ASSEMPSVKM YYESPQAVSE ARAVAFVEAQ  180
LGERLRDDGP ILGMEFDPLP PGAFGAPIVQ QNLAVRPYDA KPFDAKPVKG GIKAVHEYQF  240
LPEQPSVRSD SYERATTSQY HGSPIDAASS RAHITPNSGF GFKGPVNLLP QHGMETPTSV  300
AAHPITGIEN PFATPVTHEE AMARIARKRK SEEARIAKEV EANQKRLKKE LEKQDVLRRK  360
REEQMRKEME RHDRERRKEE ERLLREKQRE EERYQREQRR EMERRMKFLQ KESMRAEKLR  420
LKEDMRKEKE AARLKAANDR AAARRLAKES LELIDDERLE LMEIAASTKG LPSMLSLDSE  480
ALENLESLRD MLPEFPPKSV HLKRPFKFEP WTDSEENIGN LLMVWKFLIT FADVLGLWPF  540
TLDEFVQAFH DHDPRLLGEI HVALLKSIVK DIEDVAKAPS SLAANQIGPP NPGGGHPQIV  600
EGAFAWGFDI CSWQRHLNPL TWPEILRQFA LAAGYGPKLK KRNVDRELPH EENEGVDGGD  660
MISNIRSGAA AKSALAKMQA RGFSNRRSRH RLTPGTVKYA AFHVLSLEGS RGLSILDVAD  720
KIQKSGLRDL TTSKTPEASI AAALSRDTKL FERTAPSTYC LKSPYRRDPA DGEAIINAAK  780
EKIHTFKNGL LDGEEAFDAE RDDAEKEEDS DSDVPDDPEV DDIGIISVSG VQSETVGDIK  840
VESLVDQPNI GVNHLTKKGV AAPDEDAVVD ESISGEVWVQ GLMEGEYSDL TVEERLNALV  900
ALISVANEGN SIRVLLEERL ETAMAIKKQM LADAQVDRRR MREEFMIKIQ YPSVDDRMDY  960
MSNNQQENVG DLHDDLGNLN ERLLEPAYAA EKTRAQLKFF ISHKAEELFV YRSLPLGQDR  1020
RRNRYWQFIT SASQNDPGCG RIFVELCDGR WRLIDNEESF NVLLASLDVR GNREAQLHSM  1080
LQRIEARFKE SVSKMWVNVP EAGPMGSGSP SSTVSLPKTD ASEFSSTFAI EHGRNGDEMT  1140
NAIKRYQSFE KWMWRECLNL WAMKFGSTRC ENILEVCDNC LDLSFFENGQ CSSCHKLCET  1200
FFGSNLAFSK HLSRFKEKLK SESVLCFHDR ESGHPVRFRL IKALLALIEA SVPLEALQPS  1260
WTDECRKAWC VKLVNAVTVD ALLEALTLLE SSIKRDYLSL DFETTDELLG SDNSAALLAS  1320
KDCSTVSVLP WLPETTSSVA LRLMELDTSL YYLLSQKEDA EKDKEATNVL ILHPKFAAAM  1380
KNGEEGDQGE SLYGSGNLHD PWADPVTSGR GRGRGRGRGR SRGGRSQRSV AASGSRSNAK  1440
GRPRGRGGRK RGRRGGQTKP HNTVQITEHD SSRDYLYEES PVLGFQDWNA EEIADLHATE  1500
NASSSEYEIE NENENAGVDE YDDDMMVDDG YHQKAYNNIP SREYIGEYDL EEDDEVMDEY  1560
EDEDEQAGVD VDGFFNDDAD ENRDLDVGGG HVGNPGDETE LSSSGYSD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	327	348	RKRKSEEARIAKEVEANQKRLK
2	1410	1419	RGRGRGRGRG
3	1410	1420	RGRGRGRGRGR
4	1412	1422	RGRGRGRGRGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28420.1	0.0	HB-other family protein