PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc003888.1_g070.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family SBP
Protein Properties Length: 281aa    MW: 31570.2 Da    PI: 8.493
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc003888.1_g070.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP44.83.2e-141031334878
                            SEEETTT--SS--S-STTTT-------S--- CS
                    SBP  48 rfhelsefDeekrsCrrrLakhnerrrkkqa 78 
                             fh++sefDeekrsCrrrL++hn+rrrk+++
  Cse_sc003888.1_g070.1 103 LFHSMSEFDEEKRSCRRRLSDHNARRRKPNE 133
                            4***************************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    
DDTTTRRHLH QILHNSHYPT APPPDATSTR YISFPAAFNT DGLIIGTTTS GFVVKIWDVK  60
SQSVSLMVIS WIAENIIHLR GHWCNKQGVR PPSSVSNKDM RCLFHSMSEF DEEKRSCRRR  120
LSDHNARRRK PNEEAMRFNP AYSSFYGTES LDVLSHSTGV QLSDVLIMPN LARNRLVPSK  180
GARAEIFDQG YKDSLSSNVD AVDLRRALSL LSNNSWGSSE LDHPMLSSVS TMPHYGTMHA  240
VPHASPLSSQ QYWQANQQST DPRVDASATK TSNANNHFQE F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43270.19e-12SBP family protein