PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc003884.1_g080.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

bHLH

Protein Properties

Length: 307aa MW: 34342.1 Da PI: 6.8853

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc003884.1_g080.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36	1.2e-11	136	181	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h +Er+RR+ + ++f L llP++ kKl+Ka++L A+eY+k Lq Cse_sc003884.1_g080.1 136 HILAERKRREILSQRFIALSALLPNL-----KKLDKASVLGDAIEYMKTLQ 181 8899********************.....9****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 307 aa Download sequence
MEDSGFSFHW PVNSIDDQLS SIVAIGENMH RVDADVPLFE YYKPVMEPSP RARKELKTHS 60 MNQNLIHGSD FGILNRGTLV KPKDEAFTSS SYNSIPSPGS GNQNYYGFTE GCHGDSSGAK 120 VVPTSDRSRI SPYQDHILAE RKRREILSQR FIALSALLPN LKKLDKASVL GDAIEYMKTL 180 QEKVRTLEEQ TPETNRKSVR LEMVADEVDN SSSDEKSPCL SNQLPEIEAR FSGKDVLVRV 240 YCVKKAGIVE KTLAEIEKLN LSVINSTAII FANSALHITV IAQMDKDLAM TMKDVVKNLR 300 FSLKQFV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	140	145	ERKRRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37850.1	1e-48	bHLH family protein