PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc003816.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

MYB

Protein Properties

Length: 122aa MW: 13720.3 Da PI: 10.7646

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc003816.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.8	1.6e-15	16	61	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+WT+eEd +l+++v+ G ++ + I + ++ gR++k+c++rw + Cse_sc003816.1_g020.1 16 KGSWTPEEDAKLIQLVETQGARNLSVIGSSIP-GRSGKSCRLRWCNQ 61 799***************************.*********985 PP
2	Myb_DNA-binding	50.4	5.3e-16	70	112	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T+ Ed+ +++a+ +G++ W+ I++ ++ gRt++ +k++w++ Cse_sc003816.1_g020.1 70 PFTPHEDDVILRAHLIHGNK-WSVISKLLP-GRTDNAIKNHWNST 112 89****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 122 aa Download sequence
MTSSSSNDDV NLLKKKGSWT PEEDAKLIQL VETQGARNLS VIGSSIPGRS GKSCRLRWCN 60 QLSPNVQHRP FTPHEDDVIL RAHLIHGNKW SVISKLLPGR TDNAIKNHWN STLRRRGXVD 120 LL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37260.1	4e-48	MYB family protein