PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc003812.1_g020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | MYB | ||||||||
Protein Properties | Length: 176aa MW: 20365.3 Da PI: 10.1642 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 55.9 | 9.8e-18 | 29 | 76 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT +Ed ll+++++ +G g+W++ a+ g++Rt+k+c++rw++yl Cse_sc003812.1_g020.1 29 RGPWTLDEDNLLIQYITCHGEGRWNSLAKSSGLKRTGKSCRLRWLNYL 76 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 43.2 | 9e-14 | 83 | 125 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g+ +++E++l+++++ ++G++ W++Ia+ ++ gRt +++k++w++ Cse_sc003812.1_g020.1 83 GNLSPQEQLLILELHSKWGNR-WSKIAHQFP-GRTYNEIKNYWRT 125 6779*****************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 176 aa Download sequence |
MAIKCQIGPL TKSKSDFCFV VEEVGELRRG PWTLDEDNLL IQYITCHGEG RWNSLAKSSG 60 LKRTGKSCRL RWLNYLKPDV KHGNLSPQEQ LLILELHSKW GNRWSKIAHQ FPGRTYNEIK 120 NYWRTKVQKQ AHYLKIDSNS KKFVEALKQF WLPRLLEKVE QSSPSSSSTS TTTVDA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68320.1 | 5e-75 | MYB family protein |