PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc003732.1_g060.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | MYB | ||||||||
Protein Properties | Length: 100aa MW: 11504.2 Da PI: 9.4009 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 38.7 | 2.3e-12 | 6 | 48 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g+W++eEde l +++ ++G++ W +I++ + gR+ +c sr+++ Cse_sc003732.1_g060.1 6 GPWSPEEDEMLRNLIGKHGSN-WPLISKSIS-GRSSDSCWSRLLS 48 89*****************99.*********.**********986 PP | |||||||
2 | Myb_DNA-binding | 34.7 | 4.1e-11 | 52 | 94 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T+ Ed l ++v+++G + W++I++ ++ g +++ c +r++ Cse_sc003732.1_g060.1 52 SFTPKEDRMLQNLVEKHGHN-WSLISNSIP-GTSANTCHLRLRRT 94 79****************88.*********.**********9976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 100 aa Download sequence |
MDQIEGPWSP EEDEMLRNLI GKHGSNWPLI SKSISGRSSD SCWSRLLSLY LSFTPKEDRM 60 LQNLVEKHGH NWSLISNSIP GTSANTCHLR LRRTRLIMKI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G23290.1 | 2e-11 | MYB family protein |