PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc003732.1_g040.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | MYB | ||||||||
Protein Properties | Length: 197aa MW: 23400.8 Da PI: 7.1008 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 50.2 | 6.1e-16 | 6 | 49 | 2 | 47 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 g+W++eEde l+++++++G + W++I + ++ gR++ +c +rw+++ Cse_sc003732.1_g040.1 6 GSWSPEEDEMLLNLFRKHGLD-WSLIGKSIP-GRSDQSCMLRWFSL 49 79*****************99.*********.***********976 PP | |||||||
2 | Myb_DNA-binding | 45.8 | 1.4e-14 | 52 | 93 | 3 | 46 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 ++T+eEde l+++++++G + W++I + ++ gR++ +c +rw++ Cse_sc003732.1_g040.1 52 SFTPEEDEMLLNLFRKHGLD-WSLIGKSIP-GRSDQSCMLRWFS 93 79****************99.*********.***********86 PP | |||||||
3 | Myb_DNA-binding | 30.8 | 6.6e-10 | 98 | 139 | 4 | 47 |
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +T++Ed l +v+++ + W++I++ ++ +++k c +rw+++ Cse_sc003732.1_g040.1 98 FTPQEDRMLEYLVEKHSHN-WSLISKSIP-CKSDKTCELRWFSL 139 8****************88.*********.99*********976 PP | |||||||
4 | Myb_DNA-binding | 45 | 2.5e-14 | 142 | 181 | 3 | 44 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44 ++T+eEde l +++k +G + W++I++ ++ gR++k c++rw Cse_sc003732.1_g040.1 142 SFTPEEDEMLQNLIKNHGRN-WSLISNSIP-GRSAKTCRLRW 181 79****************66.*********.*********** PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 197 aa Download sequence |
MGQIEGSWSP EEDEMLLNLF RKHGLDWSLI GKSIPGRSDQ SCMLRWFSLQ KSFTPEEDEM 60 LLNLFRKHGL DWSLIGKSIP GRSDQSCMLR WFSIFWLFTP QEDRMLEYLV EKHSHNWSLI 120 SKSIPCKSDK TCELRWFSLQ KSFTPEEDEM LQNLIKNHGR NWSLISNSIP GRSAKTCRLR 180 WEIVWKPLQI REDIENH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G23290.1 | 1e-19 | MYB family protein |