PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc003714.1_g050.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family B3
Protein Properties Length: 340aa    MW: 37781.9 Da    PI: 5.0857
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc003714.1_g050.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B347.72.7e-15129226195
                            EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS.-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEE CS
                     B3   1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesg.rsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFk 83 
                            f k+l +sdv+ ++r+vlpkk ae+h   ++ +e++ l + d +g  +W +k+++  +++s++yvl+ G+ eF ++++L+ gD ++++
  Cse_sc003714.1_g050.1 129 FSKKLQKSDVGVLKRIVLPKKPAETHlpALIAKEGIILEMDDMDGmHVWGFKFRFwpNNNSRMYVLE-GTGEFSEEHELQLGDYIMLY 215
                            889*************************8888999*******9988*******9989999999***9.******************** PP

                            E-SSSEE..EEE CS
                     B3  84 ldgrsefelvvk 95 
                            +d+  + ++v++
  Cse_sc003714.1_g050.1 216 RDS-VNLNYVIH 226
                            554.55555555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    
MERNEACGVR AFGGFDIGLG MGMGMGMGMG IGFGNDNVGV QEDSDFKSTS KIVSAPVTVA  60
GNVPVSSSTV GVDVDRDLVA AARFDFLKKK RMPRFRRGSS GVRSFRPFTS FPGPLSPNIV  120
DHGRLTFLFS KKLQKSDVGV LKRIVLPKKP AETHLPALIA KEGIILEMDD MDGMHVWGFK  180
FRFWPNNNSR MYVLEGTGEF SEEHELQLGD YIMLYRDSVN LNYVIHAVKA YEVEQFADKE  240
VKTNLATQVK SGKAPPNNSG LMNQNWPWGG LEVEVFNPIN YPTNESPVED QMDMTFVYDT  300
SYSNDTMTPL DFLGGFMSSY PTAQPNFAID NLSIDDLYKI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G26790.14e-53B3 family protein