PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc003650.1_g060.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 655aa MW: 75177.8 Da PI: 8.5997

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc003650.1_g060.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	57.1	6e-18	207	321	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..........................tekerrtraetrtgC 62 +fY +Y+k+ GF+ r+ ++k k t + f+Cs++g +e+ + k ++k+ r+r++ r+gC Cse_sc003650.1_g060.1 207 NFYVAYGKKGGFDCRRGGQYKVKGFSYATLKYFYCSRQGLNEDFNGKsgdsitdndiseqseisddshrfgdvEKKQTRKRTSFRCGC 294 6***************************************9888889******************99899999999** PP FAR1 63 kaklkvkkekdgkwevtkleleHnHela 90 a+l++kk + +evtk+e HnH+l Cse_sc003650.1_g060.1 295 SASLTIKKI-GNIYEVTKFEDGHNHPLL 321 *****.9*************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 655 aa Download sequence
GVATHAAWHR YGTIPQGNIV ASRAVWLKRH GGRHLNPKRH GGASEPEKGR ELREPPSAIG 60 LNDQWFVIVV EKVEQDKRSA IIRAHFVAPA RFAASPHFET LPPPDFAALS DLAAPFHLAA 120 PPHFQPPPHS LDLPHLHLFI LFPIKSVNLI LVEVLETQPS ADVETVRIRD HVSFYVCGKD 180 GTRTWYPDCL EKPIEGCQFI SVDQAYNFYV AYGKKGGFDC RRGGQYKVKG FSYATLKYFY 240 CSRQGLNEDF NGKSGDSITD NDISEQSEIS DDSHRFGDVE KKQTRKRTSF RCGCSASLTI 300 KKIGNIYEVT KFEDGHNHPL LSEKDMICLK NSRNMVIDCK NQKKKISVFI GDRDAQMAVE 360 KLLSRKLHSP GLMRTTSRSE SENHFFGKWT SPHLTLVEFL SHYDTAIEYQ RYIECKNDHD 420 SRYKTPKFKT ELLMEKEACK LYTRTLFFDV QDEIFGSYKY CIGLSVVQAE NMEKYAIRDT 480 EFRNGKSGDN DFADYQVDFC KSEMIVQCSC NQYESYGLLC RHAFYVLRMN NVKEFPRNYL 540 KNWWLKNTKP SRSALPRIIG ASDLVWNEVL DMYEIFESTV DRLVHDLSKM HIYKDKLQEL 600 LNQVVIDIPT IPKCDGKAVM SSMLGYLLKN YQREGRVGYA NKRKAIILGL VQGKW

Sequence ? help Back to Top

Protein Sequence Length: 655 aa Download sequence

GVATHAAWHR YGTIPQGNIV ASRAVWLKRH GGRHLNPKRH GGASEPEKGR ELREPPSAIG  60
LNDQWFVIVV EKVEQDKRSA IIRAHFVAPA RFAASPHFET LPPPDFAALS DLAAPFHLAA  120
PPHFQPPPHS LDLPHLHLFI LFPIKSVNLI LVEVLETQPS ADVETVRIRD HVSFYVCGKD  180
GTRTWYPDCL EKPIEGCQFI SVDQAYNFYV AYGKKGGFDC RRGGQYKVKG FSYATLKYFY  240
CSRQGLNEDF NGKSGDSITD NDISEQSEIS DDSHRFGDVE KKQTRKRTSF RCGCSASLTI  300
KKIGNIYEVT KFEDGHNHPL LSEKDMICLK NSRNMVIDCK NQKKKISVFI GDRDAQMAVE  360
KLLSRKLHSP GLMRTTSRSE SENHFFGKWT SPHLTLVEFL SHYDTAIEYQ RYIECKNDHD  420
SRYKTPKFKT ELLMEKEACK LYTRTLFFDV QDEIFGSYKY CIGLSVVQAE NMEKYAIRDT  480
EFRNGKSGDN DFADYQVDFC KSEMIVQCSC NQYESYGLLC RHAFYVLRMN NVKEFPRNYL  540
KNWWLKNTKP SRSALPRIIG ASDLVWNEVL DMYEIFESTV DRLVHDLSKM HIYKDKLQEL  600
LNQVVIDIPT IPKCDGKAVM SSMLGYLLKN YQREGRVGYA NKRKAIILGL VQGKW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-20	FAR1 family protein