PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc003599.1_g050.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family bHLH
Protein Properties Length: 303aa    MW: 34291.4 Da    PI: 4.6376
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc003599.1_g050.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH17.38.8e-06201246555
                            HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
                    HLH   5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                             +++ r RR++i ++  eL +l+P         +++ ae+ + A +YIk Lq
  Cse_sc003599.1_g050.1 201 QSMAARVRRRKISEKTLELGKLVPGgH------RMTTAEMFQAAFKYIKFLQ 246
                            57888*******************955......9*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    
MATLSFYPNW STFPQNRYET VIPQPPELSP FQDNLALFES NNNHFFTNNL FPCQNTIKYP  60
NLSSSYNPIS HQHYSHPLAV PSVFDHEEVF PLDYQMEPEC YLNPLEDSNV LFDNEVFSPT  120
EGMRPEYYSC NSYHSYPLVS EVCEQMQPEL PLLPEIFQFG GGSSDVMPMS YDFDNGCNVV  180
QGESTLQVKD NGDGGRKVSA QSMAARVRRR KISEKTLELG KLVPGGHRMT TAEMFQAAFK  240
YIKFLQAQVN VLQHMDSSPV LGEELQAFVT NPSIQEKLYT AGKCIITEKL GKTLTGDYQG  300
TNN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30670.11e-23bHLH family protein