PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc003538.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 308aa    MW: 34263.2 Da    PI: 4.998
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc003538.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2636.5e-20145194255
                    AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                             y+GVr+++ +g+WvAeIr p++   r+r +lg+f++aeeAa a+++a+ kl+g
  Cse_sc003538.1_g010.1 145 LYRGVRQRH-WGKWVAEIRLPKS---RTRLWLGTFDSAEEAALAYDKAAYKLRG 194
                            59******9.**********954...4*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MASAAMNFWN NNIEFQQTSS SAGGELMEAL EPFIKSTSYN IESPNYQNTL PFSTPSTSSS  60
FLPPTPSNFQ QPIFYPDYYI PITQPEYQFG SSLPDPAQFQ TQMDLDFYPQ TQWTQTNLNF  120
TPDPIPVSQT PNCLGNGSPP KPVKLYRGVR QRHWGKWVAE IRLPKSRTRL WLGTFDSAEE  180
AALAYDKAAY KLRGDYARLN FPQLRHNSND FKPLHSSVVA KLQAICQCLA EGKSVDGVKK  240
GGGKKAAAAA VKAAPPPEPV KTESESGNSS PSSDLTFPEF TADEDNVWSE NFFSLEKCPS  300
YEIDWGSI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78080.14e-48ERF family protein