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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Cse_sc003530.1_g050.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family |
NF-YC |
Protein Properties |
Length: 147aa MW: 16504.7 Da PI: 9.7081 |
Description |
NF-YC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cse_sc003530.1_g050.1 | genome | Kazusa | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NF-YC | 36.2 | 1.3e-11 | 53 | 133 | 19 | 99 |
NF-YC 19 helPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivprd 99
++P+ r+ +i+k+++ +i+ ea ++ ka e f+ +t ++ a +++ + ++++v + + fdfl d vp++
Cse_sc003530.1_g050.1 53 YNIPMQRVSRIIKSEDPNIRITQEALFVVNKASEKFLQLFTTEAYAAAFLDRKKQIDYKHLSSVVGKRKRFDFLADFVPEK 133
579**********9988889**********************************************************986 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 147 aa
Download sequence |
MTKPKPKLTK TDDVTPTTTT TTSPHSNGTN SKPDDVITTD NNNNSVNGNS ILYNIPMQRV 60 SRIIKSEDPN IRITQEALFV VNKASEKFLQ LFTTEAYAAA FLDRKKQIDY KHLSSVVGKR 120 KRFDFLADFV PEKVKAEDAL KEVPTTD
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 104 | 122 | RKKQIDYKHLSSVVGKRKR |