PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc003457.1_g070.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

HSF

Protein Properties

Length: 447aa MW: 50058.3 Da PI: 4.7469

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc003457.1_g070.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	108.5	4.9e-34	21	111	2	101
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkg 89 Fl k+y++++d+ ++e++sws++ nsfvv+++ efa+ +Lp+yFkh+nf+SF+RQLn+YgF+k++ e+ weF+++ F k+ Cse_sc003457.1_g070.1 21 FLLKTYDMVDDSITDEIVSWSSTRNSFVVWNPPEFARLLLPTYFKHNNFSSFIRQLNTYGFRKIDPER---------WEFANEDFVKN 99 9**************************************************************999.........******* PP XXXXXXXXXXXX CS HSF_DNA-bind 90 kkellekikrkk 101 +k+ll++i+r+k Cse_sc003457.1_g070.1 100 QKDLLKNIHRRK 111 ********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 447 aa Download sequence
MDGAPAKPTT TTGGGGGPAP FLLKTYDMVD DSITDEIVSW SSTRNSFVVW NPPEFARLLL 60 PTYFKHNNFS SFIRQLNTYG FRKIDPERWE FANEDFVKNQ KDLLKNIHRR KPIHSHSNPQ 120 GSTIDSERAA FEEEIDKLTL EKTALENSLS RFKQKQPVAK LQIEDLTQRV DSMEQRQDNL 180 LTFLEKAVQN PGFVDILSQK LESMDFSAYN KKRRLPSDDK SQMVPDDGFV DNQNVYRPEF 240 GNVFHHDFAN KLNLELSSAV SDNNLVSNST QSSNEDGGSP QIRFSESYVK DPQMIPTGIP 300 FATEQLELTD TGTSFTFNMD SSFVDKTRPC EEAEGNLSCL LNLSLASSVS EVNASQSTDK 360 MSRTVEEIGK NKVADFRVPE KNGKPSRGPP SNNQVAATVR APVNDVFWEQ FLTEKPGSSD 420 AEEASSNFKE DQSTSHGPNG NLQNLNL

Sequence ? help Back to Top

Protein Sequence Length: 447 aa Download sequence

MDGAPAKPTT TTGGGGGPAP FLLKTYDMVD DSITDEIVSW SSTRNSFVVW NPPEFARLLL  60
PTYFKHNNFS SFIRQLNTYG FRKIDPERWE FANEDFVKNQ KDLLKNIHRR KPIHSHSNPQ  120
GSTIDSERAA FEEEIDKLTL EKTALENSLS RFKQKQPVAK LQIEDLTQRV DSMEQRQDNL  180
LTFLEKAVQN PGFVDILSQK LESMDFSAYN KKRRLPSDDK SQMVPDDGFV DNQNVYRPEF  240
GNVFHHDFAN KLNLELSSAV SDNNLVSNST QSSNEDGGSP QIRFSESYVK DPQMIPTGIP  300
FATEQLELTD TGTSFTFNMD SSFVDKTRPC EEAEGNLSCL LNLSLASSVS EVNASQSTDK  360
MSRTVEEIGK NKVADFRVPE KNGKPSRGPP SNNQVAATVR APVNDVFWEQ FLTEKPGSSD  420
AEEASSNFKE DQSTSHGPNG NLQNLNL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G13980.1	1e-134	HSF family protein