PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc003447.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB
Protein Properties Length: 338aa    MW: 38503.2 Da    PI: 7.1008
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc003447.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding59.47.8e-191259148
                           TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                           +g+WT++Ed++l+++v+ +G+g+W+t ++  g+ R++k+c++rw +yl
  Cse_sc003447.1_g010.1 12 KGPWTEDEDLKLIQYVHTHGPGNWRTLPKNAGLQRCGKSCRLRWTNYL 59
                           79********************************************97 PP
2Myb_DNA-binding53.65e-1765109147
                            TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
        Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                            rgr++ eE+e +++++  lG++ W++Ia++++ gRt++++k++w+++
  Cse_sc003447.1_g010.1  65 RGRFSFEEEETIIQLHSVLGNK-WSAIAARLP-GRTDNEIKNYWNTH 109
                            89********************.*********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    
MRKLPSQNGL KKGPWTEDED LKLIQYVHTH GPGNWRTLPK NAGLQRCGKS CRLRWTNYLR  60
PDIKRGRFSF EEEETIIQLH SVLGNKWSAI AARLPGRTDN EIKNYWNTHI RRRLLKNGID  120
PVTHTPRVDF LELSNILNAA KINLSNLLNI QTLVNPQLLT QAALVASSNK ENQELFLNNN  180
INNPMNPNLK QQDPNFTCSP SNFRSTQNVS QTHPMQINDV QLPPVNLVNM NTDASSQDIL  240
MRTRLTEDCF NISNYGSQFT SVATESSSFQ PLYTENNMPA TQTFNGDSVL SSPMTSPAPF  300
ISSSTFINNR STEDERESYC SNMFKLDIEE SFELNDFM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21440.11e-91MYB family protein