PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc003444.1_g040.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | NAC | ||||||||
Protein Properties | Length: 283aa MW: 32762.9 Da PI: 8.5594 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 175 | 2.2e-54 | 9 | 134 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 lppGfrFhPtdeel+++yL++++ +k++++ +i+evdiyk++PwdLp+k++ +ekewyfF++rd+ky++g r+nra+ sgyWkatg+ Cse_sc003444.1_g040.1 9 LPPGFRFHPTDEELIMFYLRNQALSKPCPV-AIIPEVDIYKFDPWDLPEKAEFGEKEWYFFTPRDRKYPNGVRPNRAAVSGYWKATGT 95 79****************************.88***************99999*********************************** PP NAM 89 dkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 dk+++s +++ vg+kk Lvfykgr pkg+ktdW+mheyrl Cse_sc003444.1_g040.1 96 DKAIYS-GSKYVGVKKALVFYKGRPPKGVKTDWIMHEYRL 134 ******.999****************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 283 aa Download sequence |
MVGKDNSNLP PGFRFHPTDE ELIMFYLRNQ ALSKPCPVAI IPEVDIYKFD PWDLPEKAEF 60 GEKEWYFFTP RDRKYPNGVR PNRAAVSGYW KATGTDKAIY SGSKYVGVKK ALVFYKGRPP 120 KGVKTDWIMH EYRLNESRSQ PTTKKIGSMR LDDWVLCRIY KKKSPERPVE QREGNINNAQ 180 NVPSENQNVV ELQSMNIPRT FSLAHLWELE SLGSISHLLD DHNMNYENNT GIETGATMGI 240 MSQSSSTPYQ GTRLREPHSI KFEENYQNNN ISQPNFYNSM FEF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69490.1 | 1e-111 | NAC family protein |