PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc003405.1_g050.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | FAR1 | ||||||||
Protein Properties | Length: 233aa MW: 26141.7 Da PI: 10.0413 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 73.5 | 4.5e-23 | 92 | 183 | 1 | 90 |
FAR1 1 kfYneYA..kevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHn 86 kfY+eYA ++vGF++r+++ ++s+ +++i++r++ C+k g+ ++ k++ + r++++++r gC+a++ v+ ++ gkw+vt++ +eH+ Cse_sc003405.1_g050.1 92 KFYDEYAntRRVGFKMRIDQCRRSEVDKRIISRQLSCNKVGYYTKAKNQFGQIRNQHTSSRQGCNAMMLVRVNEFGKWVVTRFGKEHT 179 6*****94458***************************************************************************** PP FAR1 87 Hela 90 H+l+ Cse_sc003405.1_g050.1 180 HSLV 183 *996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 233 aa Download sequence |
MGFPGQNEFE ASELTRPADT NAAPKPRIRA YSFVLHIQKN TAPYQTSSSN LLIRSTQVSS 60 ADVNIAAGLV GNGDVLCVNK HPLQKNRSAA KKFYDEYANT RRVGFKMRID QCRRSEVDKR 120 IISRQLSCNK VGYYTKAKNQ FGQIRNQHTS SRQGCNAMML VRVNEFGKWV VTRFGKEHTH 180 SLVISPCLSL SEGDCKERKI QALTSELKHQ DNQVSMDPVL TLCSNLSSNI TVD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G43280.1 | 5e-36 | FAR1 family protein |