PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc003327.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 197aa    MW: 22379.4 Da    PI: 9.4874
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc003327.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR129.42.7e-0928108789
                   FAR1   7 AkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 
                            A++vGF ++k ++k+    g  ++ ++ Cs++g +++e  + ++ +r++++ +++C  +l  k  k ++ w +   +  HnH +
  Cse_sc003327.1_g030.1  28 AESVGFVIVKGRTKTD--RGYKYSIELLCSRNGISAREGLE-DELERQTSTAKINCPFRLLAKFIKrQNGWILRVKDPRHNHVF 108
                            899********98888..6667****************999.8888899999***********99989999999999*****76 PP
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    
MCGSAQRWTH VYVFGNEVAL IDWVKSTAES VGFVIVKGRT KTDRGYKYSI ELLCSRNGIS  60
AREGLEDELE RQTSTAKINC PFRLLAKFIK RQNGWILRVK DPRHNHVFLD SFHGFSQAMR  120
LKENEFVLVK QLTEQHSDPN NVSGIKTIYN AQDNIRHANR GDLTPIQLLF VHLQRQDLNE  180
GPNEEPGGIT GIGKKSS