PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc003324.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NAC
Protein Properties Length: 332aa    MW: 37197.9 Da    PI: 8.5458
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc003324.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM177.63.4e-55181431128
                    NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 
                            lppGfrFhPtdeel+++yL kkv+++++++ ++i+ vd++++ePw+Lpk +k +ekewyfF+ rdkky+tg r+nrat++gyWkatgk
  Cse_sc003324.1_g010.1  18 LPPGFRFHPTDEELITHYLIKKVANNNFSA-KAIAVVDMNRIEPWQLPKLAKMGEKEWYFFCVRDKKYPTGLRTNRATEAGYWKATGK 104
                            79***************************9.88***************9888999********************************* PP

                    NAM  89 dkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                            dke+l+ +++lvg+kktLvfykgrapkgekt+Wv+he+rl
  Cse_sc003324.1_g010.1 105 DKEILK-GQTLVGMKKTLVFYKGRAPKGEKTNWVIHEFRL 143
                            *****9.999****************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    
MMMEGYSIVG RDDEQMMLPP GFRFHPTDEE LITHYLIKKV ANNNFSAKAI AVVDMNRIEP  60
WQLPKLAKMG EKEWYFFCVR DKKYPTGLRT NRATEAGYWK ATGKDKEILK GQTLVGMKKT  120
LVFYKGRAPK GEKTNWVIHE FRLDGNSCAQ TAPKSAKIEW VICRVFHKSS GEKKPSSSGN  180
GLPQLSESST SSGGYGNSSG VIKSESLNVP CFSNPINIQN QQNSFLNNAS YPFDPISNSN  240
YVLSDSPQFQ FPYGHAFSAP NQTYLRGLMG NNPVQMDKEI RTGSQETGIS SEMNTEISSV  300
MSNFKMGKRG FDDQEAPSTS DGPIDMDSFW NY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61430.11e-111NAC family protein